Table 1. mtDNA haplogroup frequencies in six Indian Muslims and potential source populations.

Haplogroups	Indian Shiaa	Indian Sunnia	Dawoodi Bohra (TN)a	Dawoodi Bohra (GUJ)a	Mapplaa	Iranian Shiaa	Indian non-Muslimsb	Arabiac	Iranb
No. of individuals	120	131	62	50	61	48	598	553	436
Central Asiand	0.01	0.01	0.13	0.02	0.07	0.10	0.04	—	0.03
West Eurasiane	0.15	0.05	0.15	0.14	0.05	0.54	0.14	0.61	0.75
Africanf	—	—	0.05	—	—	—	—	0.13	—
Arabiang	—	—	0.15	0.08	—	—	0.01	0.18	0.03
U7	0.06	0.06	0.05	0.10	0.05	0.04	0.05	0.01	0.09
W	0.03	0.02	0.05	0.02	—	0.04	0.02	0.01	0.03
Indianh	0.76	0.85	0.44	0.64	0.84	0.27	0.74	0.06	0.07

^aPresent study, (TN, Tamil Nadu and GUJ, Gujarat).

^bComparative data are from Metspalu et al.¹⁷

^cComparative data are from Abu-Amero et al.²⁰

^dCentral Asian haplogroups include A, B, F, MD and MG.

^eWest Eurasian haplogroups include H, HV, I, J, T, U, U1, U2, U2e, U3, U4, U5, U6, N, N1, N2, U9, UK and X.

^fAfrican haplogroups include L and M1.

^gArabian haplogroups include pHV (R01).

^hIndian haplogroups include M^*, M18, M2, M25, M3, M4, M5, M6, M30, M31, M33, M34, M35, M36, M37, M38, M40, M45, M46, M47, M49, M52, R^*, R2, R30, R31, R5, R6, R7, R8, U2a, U2b and U2c.

For detailed haplogroup frequencies of all the six Indian Muslim populations see Supplementary Table 2.