Table 4.
Chromosome | No. of SNPs tested | No. of SNPs assigned to same chromosome | No. of SNPs assigned a different chromosome | No. of SNPs not assigned |
---|---|---|---|---|
1 | 3635 | 3585 | 2 | 48 |
2 | 2774 | 2732 | 3 | 39 |
3 | 2612 | 2551 | 12 | 49 |
4 | 2517 | 2470 | 4 | 43 |
5 | 2260 | 2221 | 4 | 35 |
6 | 2597 | 2570 | 1 | 26 |
7 | 2244 | 2204 | 4 | 36 |
8 | 2378 | 2344 | 2 | 32 |
9 | 1993 | 1958 | 4 | 31 |
10 | 2281 | 2241 | 10 | 30 |
11 | 2389 | 2337 | 2 | 50 |
12 | 1677 | 1646 | 3 | 28 |
13 | 1909 | 1880 | 3 | 26 |
14 | 1771 | 1747 | 1 | 23 |
15 | 1808 | 1781 | 2 | 25 |
16 | 1654 | 1627 | 0 | 27 |
17 | 1661 | 1626 | 0 | 35 |
18 | 1474 | 1436 | 2 | 36 |
19 | 1577 | 1538 | 2 | 37 |
20 | 1616 | 1603 | 0 | 13 |
21 | 1377 | 1343 | 2 | 32 |
22 | 1313 | 1279 | 2 | 32 |
23 | 1258 | 1223 | 2 | 33 |
24 | 1339 | 1319 | 1 | 19 |
25 | 1087 | 1065 | 1 | 21 |
26 | 1062 | 1042 | 2 | 18 |
27 | 1014 | 969 | 1 | 44 |
28 | 1004 | 980 | 1 | 23 |
29 | 1070 | 1040 | 0 | 30 |
X | 711 | 630 | 8 | 73 |
Total | 54062 | 52987 | 81 | 994 |