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. Author manuscript; available in PMC: 2011 Mar 30.
Published in final edited form as: Biochemistry. 2010 Mar 30;49(12):2753–2762. doi: 10.1021/bi902200n

TABLE 3. Docking equilibria in the absence and presence of AUCG or AUCI for the WT and A261H ribozymes (see Scheme 2).

Ribozyme
KdockES
Bound nucleophile
KdockESAUCX
(unitless) Relative (unitless) Relative
WT 18 (1.0) AUCG 47* (1.0)
AUCI 18* 2.6

A261H 14 1.3 AUCG 3 16
AUCI 8* 5.9
*

= calculated from the thermodynamic framework of Scheme 2