Table III.
Superposition of YtaA with Representative Structures from a Search with the Dali Server60
| Structure | Classification | PDB ID: chain | Dali Z-score | RMSD (Å) | Aligned positions | %ID |
|---|---|---|---|---|---|---|
| Homoserine kinase 2 | CAK | 2PPQ:A | 23.5 | 3.2 | 287 | 16 |
| Choline/ethanolamine kinase | CAK | 3DXQ:A | 18.9 | 3.9 | 265 | 13 |
| YihE | CAK | 1ZYL:A | 18.4 | 4.1 | 273 | 14 |
| Choline kinase α-2 (ChoK) | CAK | 1CKP:A | 15.6 | 3.9 | 259 | 14 |
| Methylthioribose kinase (MTRK) | CAK | 2PUN:A | 15.1 | 4.0 | 260 | 12 |
| Aminoglycoside phosphotransferase (APH) | CAK | 1L8T:A | 13.1 | 5.1 | 219 | 12 |
| RIO1 | Rio | 1ZTH:C | 9.9 | 3.6 | 168 | 15 |
| Protein kinase A (PKA) | ePK | 1CDK:A | 7.7 | 3.4 | 162 | 14 |
Structures with IDs in italics were used in analysis and comparisons with YtaA.