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. 2010 May;176(5):2247–2258. doi: 10.2353/ajpath.2010.090048

Table 1.

Real-time RT-PCR primers

Gene Sequence Primer size Tm (°C)
TNF F: 5′-AAGCCTGTAGCCCATGTTGTA-3′ 21 mer 52
R: 5′-TCAGCTCCACGCCATTG-3′ 17 mer 49
MMP-9 F: 5′-GGGAGACGCCCATTTCG-3′ 17 mer 52
R: 5′-CGCGCCATCTGCGTTT-3′ 16 mer 49
MMP-13 F: 5′-CAGACTTCACGATGGCATTGC-3′ 21 mer 54
R: 5′-AGGAAAAGCATGAGCCAGCA-3′ 20 mer 52
Collagen I F: 5′-CAGCCGCTTCACCTACAGC-3′ 19 mer 55
R: 5′-TTTTGTATTCAATCACTGTCTTGCC-3′ 25 mer 53
α-SMA F: 5′-CGTGGGTGACGAAGCACAG-3′ 19 mer 55
R: 5′-GGTGGGATGCTCTTCAGGG-3′ 19 mer 55
Twist-1 F: 5′-TGAGCAACAGCGAGGAAGAGC-3′ 22 mer 52
R: 5′-TGAATCTTGCTCAGCTTGTCCG-3′ 22 mer 50
Slug F: 5′-ACAAGCAGCTGCACTGTGAT-3′ 20 mer 55
R: 5′-ACACAAGGCAATGTGTGGGT-3′ 20 mer 55
E-cadherin F: 5′-ACAACAAGCCCGAATTCACCCA-3′ 22 mer 55
R: 5′-TCACAGCTGTTGCTGTTGTGCT-3′ 22 mer 55
N-cadherin F: 5′-TCATTGCCATCCTGCTCTGCAT-3 22 mer 55
R: 5′-AGTTGTTTGGCCTGGCGTTCTT-3′ 22 mer 55
Vimentin F: 5′-AAAGTGTGGCTGCCAAGAACCT-3′ 22 mer 55
R: 5′-ATTTCACGCATCTGGCGTTCCA-3′ 22 mer 55
BMP2 F: 5′-AACACTGTGCGCAGCTTCC-3′ 19 mer 55
R: 5′-CTCCGGGTTGTTTTCCCAC-3′ 19 mer 55
GAPDH F: 5′-GAAGGTGAAGGTCGGAGT-3′ 18 mer 50
R: 5′-GAGATGGTGATGGGATTTC-3′ 20 mer 50