ABL: |
|
|
F-ABL-A2: |
5′-TGA CTT TGA GCC TCA GGG TCT GAG TGA AGC C-3′ |
|
R-ABL-A3: |
5′-CCA TTT TTG GTT TGG GCT TCA CAC CAT TCC-3′ |
|
Annealing temperature: |
70°C |
|
Reference sequence (mRNA): |
GenBank:NM_007313
|
|
Reference sequence (genomic DNA): |
GenBank:U07563
|
|
Nucleotide position (mRNA): |
159–374 |
|
Nucleotide position (genomic DNA): |
49914–50692 |
|
RT-PCR product: |
216 bp |
|
PCR product: |
779 bp |
|
Taq polymerase: |
TaKaRa ExTaq HS (Lonza) |
|
|
EBV: |
|
|
F-EBV (TC-70): |
5′-CTT GGA GAC AGG CTT AAC CAG ACT CA-3′ |
|
R-EBV (TC-72): |
5′-CCA TGG CTG CAC CGA TGA AAG TTA T-3′ |
|
Annealing temperature: |
60°C |
|
Reference sequence: |
GenBank: V01555
|
Nucleotide positions: 83520–83784 |
PCR product (wild type): |
265 bp |
PCR product (internal control): 445 bp |
Taq polymerase: |
TaKaRa Taq HS (Lonza) |
|
|
HBV: |
|
|
F-HEPB: |
5′-AAG CTG TGC CTT GGG TGG CTT-3′ |
|
R-HEPB: |
5′-CGA GAT TGA GAT CTT CTG CGA C-3′ |
|
Annealing temperature: |
55°C |
|
Reference sequence: |
GenBank: NC_003977
|
Nucleotide positions: 1874–2436 |
PCR product (wild type): |
563 bp |
PCR product (internal control): 906 bp |
Taq polymerase: |
BioTherm Taq polymerase (Gene Craft, Lüdinghausen, Germany) |
|
HCV: |
|
|
F-HCV: |
5′-GCC ATG GCG TTA GTA TGA GT-3′ |
|
R-HCV: |
5′-RTG CAC GGT CTA CGA GAC CT-3′ |
|
Annealing temperature: |
55°C |
|
Reference sequence: |
GenBank: NC_004102
|
Nucleotide positions: 82–340 |
PCR product (wild type): |
259 bp |
PCR product (internal control): 452 bp |
Taq polymerase: |
TaKaRa ExTaq HS (Lonza) |
|
|
HHV-8: |
|
|
F-HHV-8: |
5′-AGC CGA AAG GAT TCC ACC AT-3′ |
|
R-HHV-8: |
5′-TCC GTG TTG TCT ACG TCC AG-3′ |
|
Annealing temperature: |
56°C |
|
Reference sequence: |
GenBank: NC_009333
|
Nucleotide positions: 47386–47618 |
PCR product: |
232 bp |
|
Taq polymerase: |
TaKaRa ExTaq HS (Lonza) |
|
|
HIV-1: |
|
|
F-HIV (SK38): |
5′-ATA ATC CAC CTA TCC CAG TAG GAG AAA T-3′ |
|
R-HIV (SK39): |
5′-TTT GGT CCT TGT CTT ATG TCC AGA ATG C-3′ |
|
Annealing temperature: |
50°C |
|
Reference sequence: |
GenBank: NC_001802
|
Nucleotide positions: 1090–1204 |
PCR product (wild type): |
114 bp |
PCR product (internal control): 403 bp |
Taq polymerase: |
TaKaRa Taq HS (Lonza) |
|
|
HTLV-I/-II: |
|
|
F-HTLV (SK110): |
5′-CCC TAC AAT CCA ACC AGC TCM G-3′ |
|
|
5′-CCT TAC AAT CCA ACC AGC TCA G-3′ |
|
|
5′-CCA TAC AAC CCC ACC AGC TCA G-3′ |
|
R-HTLV (SK111): |
5′-GTG RTG GAT TTG CCA TCG GGT T-3′ |
|
|
5′-GTG GTG AAG CTG CCA TCG GGT T-3′ |
|
Annealing temperature: |
60°C |
|
Reference sequence: |
GenBank: NC_001436
|
Nucleotide positions: 4384–4569 |
PCR product (wild type): |
186 bp |
PCR product (internal control): 405 bp |
Taq polymerase: |
TaKaRa Taq HS (Lonza) |
|
|
SMRV: |
|
|
F-SMRV-env: |
5′-GGC GGA CCC CAA GAT GCT GTG-3′ |
|
R-SMRV-env: |
5′-TGG GCT AGG CTG GGG TTG GAG ATA-3′ |
|
Annealing temperature: |
67°C |
|
Reference sequence: |
GenBank: M23385
|
Nucleotide positions: 6857–7053 |
PCR product: |
197 bp |
|
Taq polymerase: |
TaKaRa Ex Taq HS (Lonza) |
|
F-SMRV-gag: |
5′-TCA GAG CCC ACC GAG CCT ACC TAC-3′ |
|
R-SMRV-gag: |
5′-CAG CGC AGC ACG AGA CAA GAA AA-3′ |
|
Annealing temperature: |
67°C |
|
Reference sequence: |
GenBank: M23385
|
Nucleotide positions: 1737–1922 |
PCR product: |
186 bp |
|
Taq polymerase: |
TaKaRa Taq HS (Lonza) |
|