Table 5:
The means of log-likelihood ratios for detecting significant haplotype effects from 100 simulated data sets by assuming that risk haplotype is any one of four possible haplotypes for the host. The true risk haplotype for the simulated data sets is haplotype AB. The power to correctly detect risk haplotype for the host is given.
| H 2 | N | Assumed Risk Haplotype |
Power | |||
|---|---|---|---|---|---|---|
| AB | Ab | aB | ab | |||
| 0.1 | 200 | 29.43 | 16.86 | 16.23 | 19.20 | 0.67 |
| 0.4 | 200 | 98.05 | 44.32 | 43.59 | 55.70 | 0.99 |
| 0.1 | 400 | 46.27 | 25.66 | 24.57 | 29.11 | 0.86 |
| 0.4 | 400 | 181.15 | 80.32 | 76.46 | 101.07 | 1 |
| 0.1 | 800 | 80.69 | 43.92 | 39.02 | 50.96 | 1 |
| 0.4 | 800 | 352.41 | 151.54 | 150.56 | 195.94 | 1 |
| 0.1 | 2000 | 194.47 | 97.84 | 91.20 | 117.09 | 1 |
| 0.4 | 2000 | 862.63 | 365.85 | 360.20 | 481.12 | 1 |