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. 2009 Mar 30;22(3):623–639. doi: 10.1105/tpc.109.073239

Table 1.

Overview of Significantly (P < 0.05) Enriched Functional GO Categories

Transgene Category Percentage of Genes in List Adjusted P Value
35S:PcGA2ox1 GO:9725: Response to hormone stimulus 3.034 0.000262
GO:6575: Amino acid derivative metabolism 2.131 3.47E-06
GO:9698: Phenylpropanoid metabolism 1.481 3.61E-05
GO:9415: Response to water 1.445 5.41E-12
GO:9737: Response to ABA stimulus 1.102 9.17E-06
GO:8202: Steroid metabolism 0.993 1.47E-07
GO:42545: Cell wall modification 0.903 2.74E-09
GO:9250: Glucan biosynthesis 0.722 0.000725
GO:9809: Lignin biosynthesis 0.650 6.43E-05
GO:9828: Cell wall loosening 0.433 2.03E-09
35S:rgl1 GO:9725: Response to hormone stimulus 2.358 9.32E-07
GO:6575: Amino acid derivative metabolism 2.351 0.00951
GO:9698: Phenylpropanoid metabolism 1.692 4.16E-06
GO:9415: Response to water 1.307 2.00E-06
GO:42545: Cell wall modification 1.051 1.64E-09
GO:8202: Steroid metabolism 0.974 3.05E-05
GO:9250: Glucan biosynthesis 0.897 2.70E-05
GO:9809: Lignin biosynthesis 0.769 1.43E-05
GO:30244: Cellulose biosynthesis 0.692 7.65E-05
GO:9828: Cell wall loosening 0.487 3.44E-08

A hypergeometric test was used to test enrichment significance (Rivals et al., 2007).