. Author manuscript; available in PMC: 2010 Apr 29.

Published in final edited form as: Methods Mol Biol. 2009;493:141–162. doi: 10.1007/978-1-59745-523-7_9

Table 9.2.

PCR Primer Pairs

Marker	Forward Primer (5′-3′)	Reverse Primer (5′-3′)	Product length
Gapdh	AACGGGAAGCCCATCACC	CAGCCTTGGCAGCACCAG	442 bp
Otx2	CCATGACCTATACTCAGGCTTCAGG	GAAGCTCCATATCCCTGGGTGGAAAG	211 bp
Nestin	GCCGAGCTGGAGCGCGAGTTAGAG	GCAAGGGGGAAGAGAAGGATGTCG	694 bp
Pax2	CCAAAGTGGTGGACAAGATTGCC	GGATAGGAAGGACGCTCAAAGAC	544 bp
BMP4	TGGTAACCGAATGCTGATGGTCG	GTCCAGTAGTCGTGTGATGAGGTG	598 bp
BMP7	TGGGCTTCTGAGGAGGGCTGGTTG	TGGCGTGGTTGGTGGCGTTCAT	484 bp
Jagged-1	CAGAATGACGCCTCCTGTCG	TGCAGCTGTCAATCACTTCG	361 bp
p27^Kip1	CTGGAGCGGATGGACGCCAGAC	CGTCTGCTCCACAGTGCCAGC	525 bp
Math1	AGATCTACATCAACGCTCTGTC	ACTGGCCTCATCAGAGTCACTG	449 bp
Myosin VIIA	CTCCCTCTACATCGCTCTGTTCG	AAGCACCTGCTCCTGCTCGTCCACG	628 bp
Espin	CAGCCTGAGTCACCGCAGCCTC	TGACCTGTCGCTGCCAGGGCGCG	475 bp
Brn3.1	GCCATGCGCCGAGTTTGTC	ATGGCGCCTAGATGATGC	368 bp
Musashi1	ACCTACGCCAGCCGGAGTTACAC	CTGGGGCGCTCCTGCTACCTC	444 bp
Neurofilament M	GCACATCACGGTAGAGCGCAAAG	TCGTGCGCGCACTGGAATGCG	450 bp
Peripherin	GTGAGCGTAGAGAGCCAGCAGG	TCGAAGCTCTTCCTCCAGCCGT	474 bp
GluR2	TAAAATGTGGACTTATATGAGGAGTG	CTCTCGATGCCATATACGTTGTAAC	573 bp
GluR3	GAAAATGTGGTCTTACATGAAATCCG	TGAGTGTTGGTGGCAGGAGCA	525 bp
GluR4	ATGAGGATTATTTGCAGGCAG	TCAATGAAGGTCTTAGCTGAAG	415 bp
GFAP	CCTCCGCCAAGCCAAACACGAA	ACCATCCCGCATCTCCACAGTC	433 bp
BDNF	CGCAAACATGTCTATGAGGGTTC	TAGTAAGGGCCCGAACATACGAT	302 bp
NT3	TAGAACCTCACCACGGAGGAAAC	AGGCACACACACAGGAAGTGTCT	359 bp
TrkB	GTACTGAGCCTTCTCCAGGCATC	CGTCAGGATCAGGTCAGACAAGT	305 bp
TrkC	TACTACAGGGTGGGAGGACACAC	TTTAGGGCAGACTCTGGGTCTCT	225 bp
p75^NTR	CCGATGCTCCTATGGCTACTACC	CTATGAGGTCTCGCTCTGGAGGT	353 bp