Table III. Heme characteristics and oxygenase activities of PADOX-1 with mutations in putative axial heme ligands.
Soluble recombinant GST-PADOX-1s with mutations in either the putative proximal heme ligand (His-389) or the putative distal heme ligand (His-163) were purified by affinity chromatography before their absorbance spectra were recorded, and their oxygenase activity was measured with linoleate. Activities were normalized to the amount of recombinant protein using immunoblot densities. Kd values for cyanide binding were calculated from absorbance increases near 430 nm as a function of the cyanide concentration, as done for the experiment in Fig. 7. Ki values were calculated from the decreases in activity as a function of cyanide concentration, as for the experiment in Fig. 9.
| Construct | Resting Soret peak position | Oxygenase specific activity | Kd for CN− | Ki for CN− |
|---|---|---|---|---|
| nm | % wild type | mm | µm | |
| Wild type | 413 | 100 | 13 ± 2 | 5 ± 1 |
| H163C | 414 | 6 | 1.6 ± 0.3 | 40 ± 5 |
| H163M | 420 | 17 | >280a | 127 ± 11 |
| H163Q | 414 | <1 | >240a | NDb |
| H163Y | 414 | 12 | 66 ± 12a | 18 ± 2 |
| Y386F | 413 | <1 | 11 ± 1 | NDb |
| R387H | 414 | 99 | 15 ± 2 | 31 ± 6 |
| H389C | 400 | 8 | 75 ± 10a | 32 ± 4 |
| H389M | 396 | 8 | 60 ± 6a | 30 ± 4 |
| H389Q | Nonec | Nonec | ||
| H389Y | Nonec | Nonec | ||
No isosbestic point observed (not a simple E + CNS− ⇆ E-CNS− transition).
Not determined.
Recombinant protein expressed in insoluble form.