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. Author manuscript; available in PMC: 2010 Apr 30.
Published in final edited form as: J Biol Chem. 2004 Apr 20;279(28):29805–29815. doi: 10.1074/jbc.M401779200

Table III. Heme characteristics and oxygenase activities of PADOX-1 with mutations in putative axial heme ligands.

Soluble recombinant GST-PADOX-1s with mutations in either the putative proximal heme ligand (His-389) or the putative distal heme ligand (His-163) were purified by affinity chromatography before their absorbance spectra were recorded, and their oxygenase activity was measured with linoleate. Activities were normalized to the amount of recombinant protein using immunoblot densities. Kd values for cyanide binding were calculated from absorbance increases near 430 nm as a function of the cyanide concentration, as done for the experiment in Fig. 7. Ki values were calculated from the decreases in activity as a function of cyanide concentration, as for the experiment in Fig. 9.

Construct Resting Soret peak position Oxygenase specific activity Kd for CN Ki for CN

nm % wild type mm µm
Wild type 413 100 13 ± 2 5 ± 1
H163C 414 6 1.6 ± 0.3 40 ± 5
H163M 420 17 >280a 127 ± 11
H163Q 414 <1 >240a NDb
H163Y 414 12 66 ± 12a 18 ± 2
Y386F 413 <1 11 ± 1 NDb
R387H 414 99 15 ± 2 31 ± 6
H389C 400 8 75 ± 10a 32 ± 4
H389M 396 8 60 ± 6a 30 ± 4
H389Q Nonec Nonec
H389Y Nonec Nonec
a

No isosbestic point observed (not a simple E + CNSE-CNS transition).

b

Not determined.

c

Recombinant protein expressed in insoluble form.