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. 2010 Mar 25;11:154. doi: 10.1186/1471-2105-11-154

Table 4.

TimeDelay-ARACNE test on the E. coli eight genes network.

Genes SOS True Relations Correct Wrong
recA lexA - -

lexA uvrD, umuDC, recA, uvrA, uvrY, ruvA, polB. uvrD, umuDC, recA, uvrA, ruvA, polB. -

uvrY - - lexA

TimeDelay-ARACNE correctly infers the lexA to recA edge but can not infer recA to lexA edge due a limitation of the algorithm. TimeDelay-ARACNE also infers lexA to uvrY edge but the direction is wrong.