TABLE 1.
Organization of the all subcluster involved in allyl side chain-providing extender unit of the FK506 gene cluster
Gene No. | Gene name | Proposed function | Start | Stop | Length (amino acids) | Closest characterized homolog |
---|---|---|---|---|---|---|
1 | allA | Acyltransferase and acyl-carrier protein | 2775 | 4067 | 431 | Homologs of both genes are found in many species of Burkholderia; none of them is characterized (37) |
2 | allK | Ketoacyl synthase | 4078 | 6465 | 796 | |
3 | allR | Enoyl-CoA reductase | 6465 | 7799 | 445 | Approximately 60% identity to ccr genes from Streptomyces cinnamonensis and Streptomyces collinus (39) |
4 | allD | Acyl-CoA dehydrogenase | 7799 | 8956 | 386 | 32% identical to medium chain acyl-CoA dehydrogenase from Thermus Thermophilus; no close homologs in Streptomyces species (40) |
5 | allM | Methionine γ lyase | 10126 | 8975 | 384 | 38% identical to l-methionine γ-lyase from Citrobacter freundii (42) |
6 | allN | Transcriptional regulator | 10186 | 10650 | 155 | Homologous to AsnC family of transcriptional regulators present in many bacterial species (33) |
7 | allP | P450 monooxygenase | 10757 | 11983 | 409 | 46% identical to Streptomyces coelicolor A3(2) Cyp154c1, a monooxygenase that functionalizes macrolide ring systems (43) |
8 | allO | Acyl-CoA oxidoreductase | 12171 | 13358 | 395 | 30% identical to 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione hydroxylase from Rhodococcus jostii; belongs to acyl-CoA dehydrogenase (type 2) superfamily (41) |
9 | allS | Acetoacetyl-CoA reductase or acetoacetyl-ACP reductase | 13467 | 14120 | 218 | 45% identical to 3-oxoacyl-[acyl-carrier-protein] reductase from Escherichia fergusonii; also similar to acetoacetyl-CoA reductase from several species (38) |