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. 2010 Mar 24;48(5):1683–1689. doi: 10.1128/JCM.01947-09

TABLE 2.

GenoType MTBDRsl test results for the detection of resistance to aminoglycosides and cyclic peptide in 52 M. tuberculosis strainsa

No. of strains Drug resistance phenotypeb
Sequencing data [nucleotide or amino acid change(s) or wt]
No. of strains with the following result by the MTBDRsl test:
KAN AMK CAP STR rrs [nucleotide change(s) or wt]
RpsL (amino acid change or wt) wt Mutationc
1400 region 510 region 912 region
8 R R R R A1401G wt wt K43R 4 (ΔWT1, MUTA1401G)
A1401G wt wt K88R 2 (ΔWT1, MUTA1401G)
A1401G A513C wt wt 1 (ΔWT1, MUTA1401G)
G1484T wt A907C wt 1 (ΔWT2, MUTG1484T)
1 R R R S A1401G wt wt wt 1 (ΔWT1, MUTA1401G)
1 R R S S A1401G wt wt wt 1 (ΔWT1, MUTA1401G)
2 S S R R wt wt wt wt 2
3 R S S R wt wt wt wt 2
wt C516T wt wt 1
25 S S S R wt wt wt wt 7
wt A513C wt wt 1
wt wt wt K43R 13
wt wt wt K88R 2
wt C516T wt wt 1
wt wt A907C+wt wt 1
12 S S S S wt wt wt wt 12
a

wt, wild-type.

b

AMK, amikacin; CAP, capreomycin; KAN, kanamycin; STR, streptomycin; R, resistant; S, susceptible.

c

ΔWT, lack of hybridization with the wild-type probe (WT1 or WT2).