TABLE 2.
GenoType MTBDRsl test results for the detection of resistance to aminoglycosides and cyclic peptide in 52 M. tuberculosis strainsa
| No. of strains | Drug resistance phenotypeb |
Sequencing data [nucleotide or amino acid change(s) or wt] |
No. of strains with the following result by the MTBDRsl test: |
|||||||
|---|---|---|---|---|---|---|---|---|---|---|
| KAN | AMK | CAP | STR |
rrs [nucleotide change(s) or wt] |
RpsL (amino acid change or wt) | wt | Mutationc | |||
| 1400 region | 510 region | 912 region | ||||||||
| 8 | R | R | R | R | A1401G | wt | wt | K43R | 4 (ΔWT1, MUTA1401G) | |
| A1401G | wt | wt | K88R | 2 (ΔWT1, MUTA1401G) | ||||||
| A1401G | A513C | wt | wt | 1 (ΔWT1, MUTA1401G) | ||||||
| G1484T | wt | A907C | wt | 1 (ΔWT2, MUTG1484T) | ||||||
| 1 | R | R | R | S | A1401G | wt | wt | wt | 1 (ΔWT1, MUTA1401G) | |
| 1 | R | R | S | S | A1401G | wt | wt | wt | 1 (ΔWT1, MUTA1401G) | |
| 2 | S | S | R | R | wt | wt | wt | wt | 2 | |
| 3 | R | S | S | R | wt | wt | wt | wt | 2 | |
| wt | C516T | wt | wt | 1 | ||||||
| 25 | S | S | S | R | wt | wt | wt | wt | 7 | |
| wt | A513C | wt | wt | 1 | ||||||
| wt | wt | wt | K43R | 13 | ||||||
| wt | wt | wt | K88R | 2 | ||||||
| wt | C516T | wt | wt | 1 | ||||||
| wt | wt | A907C+wt | wt | 1 | ||||||
| 12 | S | S | S | S | wt | wt | wt | wt | 12 | |
wt, wild-type.
AMK, amikacin; CAP, capreomycin; KAN, kanamycin; STR, streptomycin; R, resistant; S, susceptible.
ΔWT, lack of hybridization with the wild-type probe (WT1 or WT2).