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. Author manuscript; available in PMC: 2010 May 5.
Published in final edited form as: J Med Chem. 2002 Jul 18;45(15):3210–3221. doi: 10.1021/jm010461a

Table 2.

Set of Trial Alignments Used in Constructing the 4D-QSAR Models

graphic file with name nihms195320u1.jpg

align no. 1st atom 2nd atom 3rd atom align no. 1st atom 2nd atom 3rd atom
1 a b c 4 b d f
2 b g f 5a a b c
3a a b c 6 c e g
a

Because most compounds in the training set are symmetrical in structure, the variance of alignments are mainly made relative to asymmetrical compounds.