Table 2. Genome organisation of representative species (discussed in this contribution) within the order of Burkholderiales.
Organisma,b | Main property | Family | Principle habitat | CHR1 | CHR2 | Replicon 3 c | Replicon 4 | Year/Ref. |
C. metallidurans* CH34 | heavy metal resistance | Burkholderiaceae | heavy metal-rich sediments and soils | 3.93 | 2.58 | 0.17 (pMOL28) | 0.23 (pMOL30) | This report |
C. pinatubonensis JMP134 | degrader of xenobiotics | Burkholderiaceae | soil, aquatic; volcanic mudflow deposits | 3.81 | 2.74 | 0.63 (MPL) | 0.09 (pJP4) | unpublished |
C. eutrophus H16 | hydrogen oxidation, PHA1 metabolism | Burkholderiaceae | soil, freshwater | 4.05 | 2.91 | 0.45 (pHG1) | - | 2006/[45] |
C. taiwanensis | N2-fixing legume symbiont | Burkholderiaceae | plant root nodules | 3.42 | 2.50 | 0.56 (pRALTA) | - | 2008/[46] |
R. solanacearum GMI1000 | plant pathogen with wide host range | Burkholderiaceae | soil, rhizosphere | 3.72 | 2.09 | - | - | 2002/[223] |
B. xenovorans LB400 | PCB2 degrader | Burkholderiaceae | rhizosphere, polluted soils, landfills | 4.90 | 3.36 | 1.47 (MPL) | - | 2006/[224] |
D. acidovorans* SPH-1 | organotrophy, LAS3 degrader | Comamonadaceae | soil, aquatic, sewage | 6.77 | - | - | - | unpublished |
B. petrii* Se-1111R | degrader of aromatic compounds | Alcaligenaceae | river sediments, TCB4 contaminated soils | 5.29 | - | - | - | 2008/[148] |
Janthinobacterium sp. | heavy metal resistance, small sized | Oxalobacteraceae | aquatic, 0.22 µm filtered water | 4.11 | - | - | - | 2007/[225] |
H. arsenicoxydans | arsenic oxidation and scavenging | Oxalobacteraceae | activated sludge, industrial waste water | 3.42 | - | - | - | 2007/[226] |
P. necessarius STIR1 | obligate intracellular endosymbiont | Burkholderiaceae | freshwater ciliates | 1.56 | - | - | - | unpublished |
species that are rarely recovered from clinical samples are indicated with an asterisk (*);
only the propensity for which the species and/or particular strain is best known is given;
MPL, megaplasmid.
PHA, poly(3-hydroxybutyric acid) (cfr. ‘bioplastic’);
PCB, polychlorinated biphenyl (cfr. ‘herbicide’);
LAS, linear alkylbenzene sulfonate (cfr. ‘laundry surfactant’);
TCB, trichlorobenzene.