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. 2010 Feb 8;16(5-6):188–198. doi: 10.2119/molmed.2009.00166

Table 1.

Primer sequences and optimal conditions used in PCR analysis.

Gene Sense primer sequence (5′–3′) Antisense primer sequence (5′–3′) Amplification conditions Amplification cycles, n
SAA3 AGC CTT CCA TTG CCA TCA TTC TT AGT ATC TTT TAG GCA GGC CAG CA 94°C 1min; 58°C 1min; 74°C 1min 25
IP10 GTGTTGACATCATTGCCACG GCTTACAGTACAGAGCTAGG 95°C 30 sec; 60°C 30 sec; 45°C 45 sec 30
CCL-2 CCCCACTCACCTGCTGCTACT CACTGTCACACTGGTCACTCC 95°C 50 sec; 64°C 50 sec; 72°C 1 min 36
CCL-3 ACTGCCCTTGCTGTTCTTCTCT AGGCATTCAGTTCCAGGTCAGTGA 95°C 30 sec; 61°C 30 sec; 72°C 30 sec 33
CCL-4 CCCTCTCTCTCCTCTTGCTCGT TTCAACTCCAAGTCACTCATGTACTCA 94°C 30 sec; 55°C 30 sec; 72°C 1 min 32
CXCL-2 GCTGTCAATGCCTGAAGACC TAGTTCCCAACTCACCCTCTC 95°C 50 sec; 65°C 50 sec; 72°C 1 min 36
IL-1β AAGGAGAACCAAGCAACGAC GAGATTGAGCTGTCTGCTCA 95°C 50 sec; 63°C 50 sec; 72°C 1 min 34
CCR-2 CACGAAGTATCCAAGAGCTT CATGCTCTTCAGCTTTTTAC 94°C 30 sec; 58°C 45 sec; 72°C 70 sec 35
CCR-5 TTCCCTGTCATCGCTTGCTCT CGGATGGAGATGCCGATTTT 94°C 1 min; 60°C 1 min; 72°C 2 min 40
IL-1ra GACCCTGCAAGATGCAAGCC CAGGACGGTCAGCCTCTAGT 95°C 20 sec; 51°C 20 sec; 72°C 20 sec 36
18S GTA ACC CGT TGA ACC CCA TT CCA TCC AAT CGG TAG TAG CG 95°C 30 sec; 59°C 30 sec; 72°C 30 sec 24