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. 2010 Mar 3;26(10):1386–1389. doi: 10.1093/bioinformatics/btq098

Table 1.

IUPAC code for incomplete nucleic acid specification

Symbol Mnemonic Translation
A A (adenine)
C C (cytosine)
G G (guanine)
T T (thymine)
U U (uracil)
R puRine A or G (purines)
Y pYrimidine C or T/U (pyrimidines)
M aMino group A or C
K Keto group G or T/U
S Strong interaction C or G
W Weak interaction A or T/U
H not G A, C or T/U
B not A C, G or T/U
V not T/U A, C or G
D not C A, G or T/U
N aNy A, C, G or T/U