TABLE 2.
Comparison of likely positively selected codons identified by site-specific model M8 BEB and REL analyses in ran-like
| Positively selected codons |
||
|---|---|---|
| Codon | M8 BEB probability | REL Bayes factor |
| 48 N | 0.911 | 572.1 |
| 49 H | 0.955 | 558.1 |
| 58 V | 0.810 | 52.2 |
| 81 I | 0.748 | 53.1 |
| 92 T | 0.785 | 54.2 |
| 93 A | 0.913 | 598.3 |
| 94 K | 0.825 | 53.1 |
| 95 A | 0.958 | 469.5 |
| 131 S | 0.939 | 583.9 |
| 140 R | 0.960 | 467.6 |
| 200 F | 0.985 | 3574.9 |
| 202 D | 0.888 | 443.9 |
| 207 Y | 0.842 | 55.3 |
| 215 F | 0.921 | 389.1 |
Codons that had Bayes empirical Bayes (BEB) posterior probabilities ≥0.95 or a Bayes factor ≥50 were included in the results. Boldface values represent sites identified with statistical significance by either method. Codon number and amino acids are relative to D. simulans full-length protein.