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. Author manuscript; available in PMC: 2011 May 7.
Published in final edited form as: J Proteome Res. 2010 May 7;9(5):2649–2657. doi: 10.1021/pr100147r

Table 3.

Agreement between the results observed by 2-DE gel analysis and immunoblotting

2-DE Gels
Immunoblotting
Protein Spot # MW
(kDa)
Changea MW
(kDa)
Changea Concordance
Fibronectin 17 218 273 Yes
Fibronectin 23 133 166 Yes
Peroxiredoxin-1 18 23 23 Yes
Tenascin-C 17 218 260 Yes
200 No
170 Yes
133 Yes
GAPDH 3 38 36 No
Peroxiredoxin-2 1 22 23 No
Peroxiredoxin-3 16 16 23 No
20 No
VDAC2 3 38 38 No
Apolipoprotein A1 1 22 30 No
Collagen VI 23 133 100 No
myosin light chain 2 2 16 20 No
Peroxiredoxin-6 18 23 25 No
a

Direction of difference in spot and band intensity compared to WT; GAPDH – glyceraldehyde-3-phosphate dehydrogenase; VDAC2 – voltage-dependent anion channel 2