Table II.
Enzyme | IC50 (μM)a | Ki (μM)b | k2 (s−1)b | k1 (s−1)c |
---|---|---|---|---|
eCBL | 1.7 ± 0.2 | 1.9 ± 0.6 | (5 ± 1) × 10-4 | 263 |
R58A | 1.74 ± 0.08 | 6 ± 1 | (2.0 ± 0.4) × 10-3 | 333 |
R58K | 23 ± 1 | 55 ± 7 | (3.5 ± 0.3) × 10-3 | 64 |
R59A | 1.34 ± 0.05 | 2.7 ± 0.9 | (1.3 ± 0.4) × 10-3 | 481 |
R59K | 4.6 ± 0.3 | 12 ± 3 | (6 ± 1) × 10-4 | 50 |
D116A | 2.6 ± 0.4 | 3.9 ± 0.9 | (4.2 ± 0.9) × 10-4 | 108 |
D116N | 3.3 ± 0.6 | 2.7 ± 0.8 | (2.6 ± 0.8) × 10-4 | 92 |
W340F | 43 ± 6 | 40 ± 10 | (7 ± 2) × 10-4 | 17.5 |
R372A | n.d. | n.d. | n.d. | |
R372K | 3500 ± 1400 | 9100 ± 400 | (2.30 ± 0.02) × 10-3 | 0.25 |
R372L | n.d. | n.d. | n.d. |
Reaction conditions for IC50 measurements: Enzyme (0.024–4.3 μM, depending on the activity of the mutant) was incubated with 0.05–104 μM AVG in assay buffer at 25°C for 10 min. Activity was subsequently measured (n = 4) at a l-Cth substrate concentration of 0.1 mM and the data were fit to equation 3 to obtain the IC50 value for each enzyme.
Reaction conditions for measurement of Ki and k2: Wild-type eCBL and site-directed mutants were incubated with 1.5 mM l-Cth and 0.005–7.5 mM AVG in assay buffer and the progress of the reactions was monitored for 30 min. The progress curves were fit to equation 5 to obtain kobs values, which were plotted versus inhibitor concentration and fit to equation 6 to obtain the values of k2 and Ki.
Values of the rate constant k1, for the association of eCBL and AVG were calculated using the equation Ki = k2/k1.