Table 2.
Characteristics of primers
Gene Namea (abb.) | Gene Symbol | Primer Sequenceb | Accession Numberc | Amplicon Sizesd, bp | Annealing Tme, °C |
---|---|---|---|---|---|
Potassium large-conductance calcium-activated channel, subfamily M, α member 1 (BK-α) | Kcnma1 | F:AGGCTCTGTTCAAACGGCAT | NM_031828 | 250 | 58 |
R:TTGAGCAGATGGGCCTTGTT | |||||
Potassium large-conductance calcium-activated channel, subfamily M, β member 1 (BK-β1) | Kcnmb1 | F:ACCCATGCCTTTGGGTCAAT | NM_019273 | 236 | 58 |
R:ATAGAGGCGCTGGTACACAA | |||||
Potassium large-conductance calcium-activated channel, subfamily M, β member 2 (BK-β2) | Kcnmb2 | F:TGCCCTGCTGAATGTGTCAA | NM_176861 | 231 | 58 |
R:ACACTCACAAGGGACATGGA | |||||
Potassium large-conductance calcium-activated channel, subfamily M, β member 4 (BK-β4) | Kcnmb4 | F:TCAACATCAAAGACCAGAGGAC | NM_023960 | 107 | 58 |
R:TGAGGACACCCACCACAAAC | |||||
Potassium intermediate/small-conductance calcium-activated channel, subfamily N, member 1 (SK1) | Kcnn1 | F:AGCTCCGGACTGTGAAGATT | NM_019313 | 213 | 55 |
R:TGGCTTGGGCTATGAGACTT | |||||
Potassium intermediate/small-conductance calcium-activated channel, subfamily N, member 2 (SK2) | Kcnn2 | F:ACGCTAGTGGATCTGGCAAA | NM_019314 | 240 | 58 |
R:ACGCTCAGCATTGTAGGTGA | |||||
Potassium intermediate/small-conductance calcium-activated channel, subfamily N, member 3 (SK3) | Kcnn3 | F:CAGGAAACACCAGAGGAAGT | NM_019315 | 228 | 58 |
R:AGGGAATTGAAGCTGGCTGT | |||||
Ribosomal protein L13a (Rpl13a) | Rpl13a | F:ACAAGAAAAAGCGGATGGTGf | NM_173340 | 172 | 58 |
R:TTCCGGTAATGGATCTTTGCf | |||||
Hypoxanthine phosphoribosyltransferase 1 (HPRT) | Hprt1 | F:TTGTTGGATATGCCCTTGACTg | NM_012583.2 | 105 | 58 |
R:CCGCTGTCTTTTAGGCTTTGg |
Abbreviation used in this article (abb.).
Sequences of forward (F) and reverse (R) primers.
Accession number of GenBank (http://www.ncbi.nlm.nih.gov/).
Amplicon length in base pairs (bp).
Annealing temperature (Tm).
Sequences referenced to Bonefeld et al. (2).
Sequences referenced to van Wijngaarden et al. (47).