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. Author manuscript; available in PMC: 2011 Apr 9.
Published in final edited form as: J Mol Biol. 2010 Feb 12;397(4):893–905. doi: 10.1016/j.jmb.2010.02.015

Table 2.

Nominal values for the parameters and independent variables obtained by optimization along with confidence intervals for each value

Parameter Value
α1 0.0871±0.031 µMmin1µM813
α1,max 0.135±0.045 µMmin
α21 0.484±0.1 min−1
α22 4.09±0.31 min−1 µM−1
β22 2.6±0.63 min−1 µM−2
β1,off 0.838±0.39 min−1
β1,on 0.613±0.26 min−1
β21,off 0.0821±0.055 min−1 µM−1
β21,on 0.0634±0.042 min−1 µM−1
β31,off 0.0231±0.0015 min−1
β31,on 0.0148±0.0005 min−1
g13 −0.464±0.023
X4 0.196±0.22 µM
X5 0.455±0.13 µM
X6,off 80 µMa
X6,on 0 µMa
X3c 0.389±0.024 µM
a

X6,off and X6,on are selected to represent a well-oxygenated environment and a fully anaerobic environment, respectively.