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. Author manuscript; available in PMC: 2011 Apr 9.
Published in final edited form as: J Mol Biol. 2010 Feb 12;397(4):893–905. doi: 10.1016/j.jmb.2010.02.015

Table 4.

Percentage change in the aerobic and anaerobic steady states of dependent variables X1 (mRNA), X2 (inactive FNR), and X3 (active FNR) in response to variation in the parameters that define the system

Sensitivities
Aerobic
Anaerobic
Parameter X1 X2 X3 X1 X2 X3
α1,max1 1 0.95±0.004 1.9±0.0081 0.68±0.011 0.35±0.0055 0.69±0.011
α21 0 0.95±0.004 1.9±0.0081 −0.32±0.011 0.35±0.0055 0.69±0.011
α22 0 0.045±0.004 −0.91±0.0081 0a 0a 0a
β1,off1,on −1 −0.95±0.004 −1.9±0.0081 −0.68±0.011 −0.35±0.0055 −0.69±0.011
β21,off21,on 0 −0.91±0.0081 −1.8±0.016 0.011±0.0011 −0.012±0.0011 −0.024±0.0021
β22 0 −0.045±0.004 0.91±0.0081 −0.0055±0.0005 −0.49±0.0005 0.012±0.0011
β31,off31,on 0 −0.045±0.004 −0.091±0.0081 0.31±0.011 0.16±0.0055 −0.68±0.011
g13 b b b −0.18±0.015 −0.091±0.0074 −0.18±0.015

The parameters are as follows: α1,max1 (transcription rate), α21 (translation rate), α22 (rate of disassociation of active FNR dimer), β1,off1,on (rate of mRNA degradation), β21,off21,on (rate of degradation of inactive FNR monomer), β22 (rate of dimerization), β31,off31,on (rate of degradation of active FNR dimer), and g13 (kinetic order of repression of mRNA synthesis). The mean and standard deviation for the sensitivities are computed with respect to the parameter sets that define the confidence intervals.

a

The relevant flux for α22 is not present in the fully anaerobic state.

b

g13 is not defined for the aerobic state.