Table 4.
Sensitivities |
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Aerobic |
Anaerobic |
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Parameter | X1 | X2 | X3 | X1 | X2 | X3 |
α1,max/α1 | 1 | 0.95±0.004 | 1.9±0.0081 | 0.68±0.011 | 0.35±0.0055 | 0.69±0.011 |
α21 | 0 | 0.95±0.004 | 1.9±0.0081 | −0.32±0.011 | 0.35±0.0055 | 0.69±0.011 |
α22 | 0 | 0.045±0.004 | −0.91±0.0081 | 0a | 0a | 0a |
β1,off/β1,on | −1 | −0.95±0.004 | −1.9±0.0081 | −0.68±0.011 | −0.35±0.0055 | −0.69±0.011 |
β21,off/β21,on | 0 | −0.91±0.0081 | −1.8±0.016 | 0.011±0.0011 | −0.012±0.0011 | −0.024±0.0021 |
β22 | 0 | −0.045±0.004 | 0.91±0.0081 | −0.0055±0.0005 | −0.49±0.0005 | 0.012±0.0011 |
β31,off/β31,on | 0 | −0.045±0.004 | −0.091±0.0081 | 0.31±0.011 | 0.16±0.0055 | −0.68±0.011 |
g13 | —b | —b | —b | −0.18±0.015 | −0.091±0.0074 | −0.18±0.015 |
The parameters are as follows: α1,max/α1 (transcription rate), α21 (translation rate), α22 (rate of disassociation of active FNR dimer), β1,off/β1,on (rate of mRNA degradation), β21,off/β21,on (rate of degradation of inactive FNR monomer), β22 (rate of dimerization), β31,off/β31,on (rate of degradation of active FNR dimer), and g13 (kinetic order of repression of mRNA synthesis). The mean and standard deviation for the sensitivities are computed with respect to the parameter sets that define the confidence intervals.
The relevant flux for α22 is not present in the fully anaerobic state.
g13 is not defined for the aerobic state.