Table 1.

Enrichment scores of GO categories of genes in the vicinity of VMRs in mouse liver

GOBPID	P value	Odds ratio	Expected count	Count	Size	Term
GO:0048699	2.8E-05	2.0	26.9	49	384	Generation of neurons
GO:0009880	8.5E-05	4.9	2.8	11	41	Embryonic pattern specification
GO:0030030	0.00033	2.0	19.1	35	272	Cell projection organization
GO:0021517	0.00034	8.8	1.0	6	15	Ventral spinal cord development
GO:0035107	0.00041	2.9	6.2	16	89	Appendage morphogenesis
GO:0048666	0.00046	2.0	17.2	32	245	Neuron development
GO:0032990	0.00050	2.2	12.3	25	175	Cell part morphogenesis
GO:0009887	0.00052	1.6	35.9	56	512	Organ morphogenesis
GO:0021515	0.00055	6.2	1.5	7	22	Cell differentiation in spinal cord
GO:0048812	0.00065	2.2	11.8	24	168	Neurite morphogenesis
GO:0060173	0.00068	2.7	6.5	16	93	Limb development
GO:0007411	0.00075	2.8	5.9	15	85	Axon guidance
GO:0006270	0.00088	9.5	0.8	5	12	DNA replication initiation
GO:0001708	0.0010	4.6	2.1	8	31	Cell fate specification
GO:0000904	0.0014	2.0	13.2	25	188	Cell morphogenesis involved in differentiation
GO:0048869	0.0017	1.3	86.5	112	1,231	Cellular developmental process
GO:0007420	0.0020	1.9	15.0	27	214	Brain development
GO:0048663	0.0021	3.6	2.9	9	42	Neuron fate commitment
GO:0042415	0.0031	19.9	0.3	3	5	Norepinephrine metabolic process
GO:0009954	0.0033	4.9	1.5	6	22	Proximal/distal pattern formation
GO:0042472	0.0033	3.1	3.7	10	53	Inner ear morphogenesis
GO:0048598	0.0035	1.7	19.4	32	277	Embryonic morphogenesis
GO:0007417	0.0050	2.9	3.9	10	57	Central nervous system development
GO:0021846	0.0053	7.6	0.7	4	11	Cell proliferation in forebrain
GO:0021520	0.0058	13.2	0.4	3	6	Spinal cord motor neuron cell fate specification
GO:0021521	0.0058	13.2	0.4	3	6	Ventral spinal cord interneuron specification
GO:0045773	0.0058	13.2	0.4	3	6	Positive regulation of axon extension
GO:0021536	0.0065	4.2	1.7	6	25	Diencephalon development
GO:0035116	0.0067	5.1	1.2	5	18	Embryonic hindlimb morphogenesis
GO:0007275	0.0076	1.2	124.8	149	1,776	Multicellular organismal development
GO:0007423	0.0076	1.8	13.4	23	191	Sensory organ development
GO:0030326	0.0090	2.6	4.2	10	61	Embryonic limb morphogenesis
GO:0035270	0.0095	2.7	3.6	9	52	Endocrine system development
GO:0006268	0.0097	9.9	0.49	3	7	DNA unwinding during replication
GO:0021546	0.0097	9.9	0.49	3	7	Rhombomere development
GO:0048856	0.0099	1.2	106.1	128	1,538	Anatomical structure development