Table 1.
Transcripts Correlating to CCT with Elevated Expression in SJL/J Mice
| Gene Symbol | Gene Names | C57BLKS/J | C57B1/6J | SJL/J | Change (x-fold) | E/K |
|---|---|---|---|---|---|---|
| Development | ||||||
| BC024561 | cDNA sequence BC024561 | 2.0 | 2.0 | 7.2 | 36.1 | |
| Ceacam10 | CEA-related cell adhesion molecule 10 | 2.2 | 3.2 | 11.2 | 486.6 | |
| Clec2g | C-type lectin domain family 2, member g | 7.5 | 8.3 | 10.0 | 5.5 | |
| Klf9 | Kruppel-like factor 9 | 4.9 | 8.6 | 8.7 | 13.7 | |
| Lpin1 | Lipin 1 | 6.3 | 8.2 | 8.3 | 3.9 | |
| Map3k7 | Mitogen activated protein kinase kinase kinase 7 | 8.5 | 9.6 | 9.6 | 2.3 | K |
| Nif3l1 | Nggl interacting factor 3-like 1 | 6.7 | 8.6 | 8.5 | 3.4 | |
| Spon1 | Spondin 1 | 6.4 | 9.5 | 11.5 | 34.1 | |
| Oxidoreductase Activity | ||||||
| 4833423E24Rik | RIKEN cDNA 4833423E24 gene | 2.3 | 2.3 | 7.1 | 28.3 | |
| Cyp17a1 | Cytochrome P450, 17a1 | 2.3 | 2.3 | 7.2 | 28.9 | |
| Cyp24a1 | Cytochrome P450, 24a1 | 7.5 | 9.4 | 11.0 | 11.4 | E |
| Ero1l | ERO1-like | 9.8 | 10.0 | 12.6 | 6.8 | K |
| LOC547349 | Similar to MHC class 1 antigen precursor | 2.6 | 2.6 | 9.1 | 88.3 | |
| Mlstd2 | Male sterility domain containing 2 | 9.3 | 11.2 | 11.6 | 4.8 | |
| Mogat1 | Monoacylglycerol O-acyltransferase 1 | 2.8 | 3.7 | 7.2 | 21.1 | |
| Txnl5 | Thioredoxin-like 5 | 4.9 | 6.9 | 6.9 | 3.9 | |
| Secreted/ECM | ||||||
| Ccl28 | Chemokine (C–C motif) ligand 28 | 2.3 | 2.3 | 10.4 | 283.3 | |
| Csn3 | Casein kappa | 2.7 | 3.0 | 8.8 | 68.7 | |
| D930028F11Rik | RIKEN cDNA D930028F11 gene | 3.2 | 3.8 | 11.7 | 365.3 | |
| LOC547343 | H-2 class 1 histocompatibility antigen, L-D alpha | 7.9 | 8.4 | 10.8 | 7.3 | |
| Sectm1b | Secreted and transmembrane 1B | 2.2 | 2.2 | 7.0 | 27.6 | |
| Tm7sf3 | Transmembrane 7 superfamily member 3 | 5.8 | 7.7 | 7.7 | 3.8 | K |
| Tmem45b | Transmembrane protein 45b | 4.0 | 5.4 | 10.6 | 94.1 | |
| Signal Transduction | ||||||
| 2610305D13Rik | RIKEN cDNA 2610305D13 gene | 2.5 | 2.5 | 8.1 | 48.5 | |
| A630033E08Rik | RIKEN cDNA A630033E08 gene | 2.3 | 8.4 | 9.0 | 107.5 | |
| E2f6 | E2F transcription factor 6 | 4.5 | 7.7 | 8.9 | 21.2 | |
| Pld2 | Phospholipase D2 | 7.8 | 9.0 | 9.0 | 2.4 | E/K |
| Sh3rf1 | SH3 domain containing ring finger 1 | 4.9 | 7.7 | 7.8 | 7.3 | K |
| Snx6 | Sorting nexin 6 | 2.3 | 8.0 | 9.2 | 116.2 | K |
| Stk35 | Serine/threonine kinase 35 | 10.0 | 10.2 | 12.5 | 5.7 | |
| Transcriptional Regulation | ||||||
| Polr3gl | Polymerase (RNA) III polypeptide G | 4.4 | 4.4 | 7.6 | 9.3 | |
| Rbpms2 | RNA binding protein with multiple splicing 2 | 3.7 | 8.1 | 8.5 | 26.9 | |
| Ssu72 | RNA polymerase II CTD phosphatase homolog | 2.3 | 2.3 | 7.2 | 30.1 | K |
| Zfp277 | Zinc finger protein 277 | 7.7 | 9.6 | 10.0 | 5.2 | K |
| Pcm1 | Pericentriolar material 1 | 2.3 | 2.3 | 8.2 | 58.7 | |
| Trove2 | TROVE domain family, member 2 | 3.8 | 4.0 | 7.9 | 17.1 | |
| Protein Transport | ||||||
| Epb4.111 | Erythrocyte protein band 4.1-like 1 | 8.6 | 8.6 | 11.3 | 6.8 | |
| LOC631721 | Similar to vacuolar protein sorting 52 | 6.3 | 7.9 | 8.4 | 4.1 | |
| Pldn | Pallidin | 5.1 | 5.0 | 9.3 | 18.9 | |
| Slc4a7 | Sodium bicarbonate transporter 2 | 7.2 | 9.2 | 9.2 | 4.0 | E/K |
Expression levels are given as log2 values, showing 40 of 87 total. E/K column identifies transcripts expressed in previous microarray studies. E, transcripts expressed in laser captured murine basal epithelial cells (GDS2433); K, transcripts expressed in cultured murine corneal keratocytes (GDS857).