Table 7.
Bond (Å) | DFT | CHARMM* |
---|---|---|
O2′-P | 1.71 | 1.71 (0.00) |
O3′-P | 1.71 | 1.71 (0.00) |
P-O1P | 1.50 | 1.50 (0.00) |
P-O2P | 1.50 | 1.50 (0.00) |
Angle (°) | DFT | CHARMM* |
---|---|---|
C2′-O2′-PC | 109.4 | 109.4 (0.0) |
C3′-O3′-PC | 109.4 | 109.4 (0.0) |
O2′-PC-O3′ | 91.0 | 91.0 (0.0) |
O2′-PC-O1/2C | 109.0 | 109.0 (0.0) |
O3′-PC-O1/2C | 109.0 | 109.0 (0.0) |
O1C-PC-O2C | 124.5 | 124.5 (0.0) |
Training set average geometries for geometry fitting of 2′,3′-cyclic phosphate.