Table 1.
Effect of HIF-1α or HEF1 silencing on genes up-regulated by hypoxia. LS174T cells transfected with non-targeting HIF-1α, or HEF1 siRNA were exposed to normoxia or hypoxia for 12 hrs and then analyzed by RT-qPCR for changes in hypoxia-inducible gene expression. Results shown are expressed as fold increase of hypoxia versus normoxia. The values represent the mean of three different experiments done in triplicate ± SD. §, not significant.
Sun-Hee Kim
| Target gene | Non-targeting siRNA |
HIF-1α siRNA |
HEF1 siRNA |
|---|---|---|---|
| Integrin α-2 | 12.02 ± 2.62 | 3.64 ±0.52 | 2.54 ± 0.43 |
| PLAC8 | 4.77±0.25 | 3.080 ±0.08 | 1.85 ± 0.22 |
| ELF3 | 14.80 ± 1.08 | 1.52 ±0.03 | 6.06 ± 0.15 |
| STC1 | 14.94 ± 0.53 | 2.86 ±0.17 | 6.81 ± 0.22 |
| ADM | 34.42 ±4.88 | 9.99 ±2.37 | 20.17 ± 1.84 |
| MKNK2 | 9.60 ± 0.50 | 1.94 ±0.08 | 5.01 ± 0.49 |
| PFKP | 4.20 ± 0.55 | 1.30 ±0.15 | 2.27 ± 0.29 |
| PAI | 13.03 ± 0.47 | 3.12 ±0.57 | 7.18 ± 0.50 |
| ADFP | 12.59 ± 1.94 | 2.69 ±0.52 | 7.12 ± 1.60 |
| ALOXE3 | 4.260 ± 0.32 | 1.28 ±0.16 | 2.49 ± 0.10 |
| VEGF | 15.260 ± 1.57 | 6.39 ±1.98 | 8.57 ± 0.75 |
| BMP2 | 8.60 ± 0.50 | 2.73 ±0.33 | 5.15 ± 0.32 |
| KIT | 3.93 ± 0.09 | 1.25 ±0.08 | 2.42 ± 0.18 |
| CA9 | 18.85 ± 2.72 | 3.54 ±0.26 | 11.72 ± 1.88 |
| MMP9 | 2.42 ± 0.24 | 1.56±0.24 | 1.51± 0.23 |
| FABP1 | 8.86 ±0.32 | 3.07 ±0.30 | 6.11 ± 0.49 |
| PCK1 | 63.21 ± 5.06 | 29.98 ±2.25 | 40.61 ± 2.73 |
| NRN1 | 8.01 ± 0.08 | 2.76 ±0.49 | 5.17 ± 0.54 |
| FOS | 27.840 ± 1.26 | 12.81 ±0.58 | 16.89 ± 0.68 |
| ALOX5 | 2.73 ± 0.07 | 1.19 ±0.11 | 1.760 ±0.08 |
| DDIT4 | 12.60 ± 1.06 | 5.35 ±0.36 | 8.79 ± 0.05 |
| BHLHE40 | 24.20 ± 1.09 | 10.03 ±0.56 | 17.360 ±0.07 |
| AOAH | 5.190 ± 0.19 | 2.48 ±0.15 | 3.79 ± 0.13 |
| LRP1 | 9.28 ± 0.40 | 1.03 ± 0.09 | 6.82 ± 0.34 |
| GDF15 | 9.00 ± 0.46 | 5.55 ±0.33 | 7.70 ± 0.26 |
| BNIP2 | 8.60 ±4.51 | 2.14 ±0.42 | 4.70 ±0.58 |
| TXNIP | 6.59±1.06 | 1.81 ±0.29 | 5.06 ±0.54§ |
| ERRFI1 | 22.24 ± 1.29 | 9.01 ±0.22 | 20.80 ± 0.34§ |
| ANKRD37 | 57.83 ± 6.00 | 19.44 ±2.61 | 54.20 ± 4.49§ |
| PLOD2 | 12.02 ± 3.09 | 3.21 ±0.37 | 11.80 ± 0.89§ |
| PGK1 | 5.78 ±1.10 | 1.63 ±0.15 | 4.92 ± 0.29§ |
| PPP1R3B | 4.580 ± 0.53 | 2.7 ±0.33 | 4.52 ± 0.03§ |
| SLC2A | 21.632 ± 2.45 | 5.80 ±0.63 | 18.57 ± 0.17§ |