. Author manuscript; available in PMC: 2010 Dec 31.

Published in final edited form as: J Phys Chem B. 2009 Dec 31;113(52):16669–16680. doi: 10.1021/jp9077213

Table 1. Similarity of motions spanned by QHA, EROS and X-ray ensembles for ubiquitin.

Each entry in the table is computed via Equation 2, for the slowest 10 modes determined from each of the ensembles from the MD simulation.

	0.1 μs	0.2 μs	0.3 μs	0.4 μs	0.5 μs
0.1 μs		0.872	0.795	0.774	0.755
0.2 μs			0.880	0.855	0.783
0.3 μs				0.980	0.880
0.4 μs					0.895
EROS	0.748	0.747	0.749	0.751	0.747
XRAY	0.405	0.396	0.362	0.364	0.349