Table 2. Editing enriched traces—higher quality.

Reference genome version	G-to-A	C-to-T	A-to-G	T-to-C	Other
anoGam1	2836	2830	2907	3098	440
calJac1	3012	3362	2735	3133	145
canFam2	3170	3777	3270	3027	212
dm3	1	1	0	1	0
galGal3	1290	878	1026	1760	48
hg18	17719(82)	16778(72)	13701(188)	15301(419)	700(8)
mm9	1801(219)	1644(272)	1346(276)	1411(346)	76(11)
panTro2	3485	3120	2918	4046	240
fr2	467	449	390	482	45
xenTro2	1483(202)	1574(262)	1461(1289)	1631(1066)	269(28)

Number of traces by mismatch type with two or more mismatches at or above a quality threshold of phred 40, spanning 100bp or more. All mismatches belong to runs of three consecutive mismatches of the same type of any quality. The number of traces from the next largest substitution type, or the largest substitution type if it is not one of A-to-G, T-to-C, G-to-A, or C-to-T, is shown in the “other” column for comparison. The numbers in parentheses indicate traces of RNA origin. See Materials and Methods for more details.