Table 4.
Putative functions of differentially expressed genes
| Contig name | Gene product | Putative function | Log mean fold changes | ||
|---|---|---|---|---|---|
| AL3T/AL1T | AL9T/AL1T | Tox/Nontox | |||
| Higher expressed in toxic strains | |||||
| Amin_34h03r | putative small nuclear ribonucleoprotein polypeptide E | gene expression | 1.7 | 2.4 | 2.0 |
| Amin_36k19f | translation elongation factor-like protein | gene expression | 24.4 | 25.8 | 25.1 |
| Amin_44h09f | glycyl-tRNA synthetase | gene expression | 4.3 | 4.6 | 4.5 |
| Amin_56k21r | probable translation initiation factor E4 | gene expression | 22.6 | 28.5 | 25.4 |
| Amin_65d02r | putative Ubiquitin-like domain-containing CTD phosphatase 1 | gene expression | 3.1 | 2.3 | 2.7 |
| Amin_75e04r | putative helicase | gene expression | 24.3 | 26.1 | 25.2 |
| Amin_48i15f | putative helicase | gene expression | 26.9 | 44.8 | 34.7 |
| Amin_56g23f | putative Alpha-L-fucosidase 1 | protein glycosylation | 1.8 | 5.5 | 3.2 |
| Amin_95c08r | sialyltransferase | protein glycosylation | 20.3 | 23.5 | 21.9 |
| Amin_87p16r | casein family protein kinase | signal transduction | 9.7 | 13.0 | 11.2 |
| Amin_98a08r | endonuclease/exonuclease/phosphatase family protein | intracellular signalling | 3.6 | 4.8 | 4.2 |
| Amin_63e03r | hypothetical protein similar to Sentrin-specific protease 8 | cell cycle control | 3.7 | 3.2 | 3.4 |
| Amin_68d07f | rrm family protein similar to mei2 | cell cycle control | 2.9 | 2.5 | 2.7 |
| Amin_63c06r | RNA-binding protein similar to mei2 | cell cycle control | 1.9 | 2.6 | 2.2 |
| Amin_53e04r | chlorophyll a-c binding protein | chloroplast | 5.5 | 4.9 | 5.2 |
| Amin_81i24r | translation elongation factor P | organellar translation | 37.4 | 45.2 | 41.1 |
| Amin_97a05r | putative mitochondrial import receptor subunit tom40 | mitochondrial | 4.6 | 5.8 | 5.1 |
| Amin_70g03r | ferrochelatase | mitochondrial | 3.0 | 2.8 | 2.9 |
| Amin_40e21r | putative hydrolase | hydrolytic enzyme | 5.5 | 3.1 | 4.1 |
| Amin_82n24r | phospholipase/carboxylesterase family protein | hydrolytic enzyme | 7.2 | 8.8 | 8.0 |
| Amin_46a02r | Abhydrolase domain-containing protein | hydrolytic enzyme | 5.6 | 4.0 | 4.7 |
| Amin_95b07r | putative sulfatase, similar to Ats family arylsulfatases | hydrolytic enzyme | 3.2 | 4.2 | 3.7 |
| Amin_79g11r | hypothetical protein similar to various hydrolytic enzymes | hydrolytic enzyme | 2.1 | 3.4 | 2.7 |
| Amin_62h07r | hypothetical protein similar to glutathione S-transferase | detoxification | 4.7 | 7.0 | 5.8 |
| Amin_12c01r | aminotransferase, class I or II | Amino-transferase | 2.1 | 3.0 | 2.5 |
| Amin_93i12r | hypothetical protein similar to branched-chain-amino-acid aminotransferase | Amino-transferase | 2.5 | 4.2 | 3.3 |
| Amin_46c04r | hypothetical protein similar to Iron/ascorbate family oxidoreductases | Oxido-reductase | 7.9 | 8.8 | 8.3 |
| Amin_83a03f2 | galactose-1-phosphate uridylyltransferase | sugar metabolism | 5.2 | 8.6 | 6.7 |
| Amin_44a04r | putative steroid oxidoreductase superfamily member | secondary metabolites | 3.2 | 4.0 | 3.6 |
| Amin_53f01f | putative lipolytic enzyme, G-D-S-L family | lipid metabolism | 3.5 | 2.3 | 2.8 |
| Amin_17d04f | putative CorA-like Mg2+ transporter protein | metal ion transport | 3.5 | 3.7 | 3.6 |
| Amin_59d02r | GFA family protein | putative carbon-sulphur lyase | 20.4 | 22.8 | 21.6 |
| Higher expressed in non-toxic strain AL1T | |||||
| Amin_30a05r | cyclin-dependent kinases regulatory subunit 1 | signal transduction | -3.9 | -2.9 | -3.3 |
| Amin_74g08f | dynein heavy chain family protein | intracellular transport | -5.5 | -4.3 | -4.9 |
| Amin_44h03r | fibronectin type III domain-containing protein | putatively involved in signalling | -9.2 | -11.3 | -10.2 |
| Amin_09b02f | glutaredoxin family protein | DNA nucleotide synthesis | -4.7 | -3.2 | -3.9 |
| Amin_89h11r | hypothetical protein containing a putative 'Cold-shock' DNA-binding domain | stress response | -2.4 | -3.2 | -2.8 |
| Amin_101h04r | inorganic H+ pyrophosphatase, 3'-region. | proton pump | -3.0 | -1.9 | -2.4 |
| Amin_16h04r | peptide chain release factor 1 | translation | -8.5 | -7.5 | -8.0 |
| Amin_42k04f | hypothetical protein similar to taurine catabolism dioxygenase TauD | putative dioxygenase | -2.7 | -29.7 | -9.0 |