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. 2010 Mar 10;84(11):5583–5593. doi: 10.1128/JVI.00228-10

TABLE 1.

Synthetic oligonucleotides used in this study

Oligonucleotide Sequencea Amplification product
P1 5′-GATCGAGCTCGTTAACCGACTCGGATTTTGGGC-3′ 5′ of gD5 homology arm
P2 5′-GATCGCGGCCGCAGTTGCTCGCTCGCAGCAAC-3′
P3 5′-GATCACCGGTGCGGCCCGGGCCCTCCCCCG-3′ 3′ of gD5 homology arm
P4 5′-GATCGGTACCGTTAACGCGGTCGCCTGTAGCATGACGAAGC-3′
P5 5′-ATAAGAATGCGGCCGCATGAAGGGCCGACATTGGCCGTGc-3′ gD1 ORF fused to HA
P6 5′-GATCGAATTCTCAAGCATAATCTGGAACATCATATGGATACCCGGGCAGCGCGCTGTAGt-3′b
P7 5′-GATCGGATCCATGCGGAGGCTGGCGCTGCT-3′ gD5 ORF fused to V5
P8 5′-GATCAAGCTTTCACGTAGAATCGAGACCGAGGAGAGGGTTAGGGATAGGCTTACCCCCGGGCAGCGCGCTGTAGT-3′c
P9 5′-GATCGAGCTCGTTAACCTCCGACTACGCGCTCTACG-3′ 5′ of gD1 homology arm
P10 5′-GATCGGATCCGTTCGCCCGCTCGCAGCA-3′
P11 5′-GATCAAGCTTGGGGCCTAGGCCCTCCCCC-3′ 3′ of gD1 homology arm
P12 5′-GATCGGTACCGTTAACGCGCCGAGAGCACGGC-3′
P13 5′-GATCTCTAGAACCCGCATCCGCGGTGGCTTT-3′ 5′ of gD1 flank and gD1 ORF without stop codon
P14 5′-GATCGGATCCCCCGGGCAGCGCGCTGTAGTT-3′
P15 5′-AGTCGGATCCTGAGCGGCCTAGGCCCTCCCCCGA-3′ 3′ of gD1 flank
P16 5′-GCATGAATTCAGGATCGACGCCAGTTGGCGCCGGAA-3′
P17 5′-ACGTGGATCCCATGGTGAGCAAGGGCGAGGA-3′ YFP ORF
P18 5′-GATCGGATCCCTTGTACAGCTCGTCCATGC-3′
P19 5′-GGGCGACTAGAGATACACTCGCCCCGCGCGGCTGCTGCGAGCGGGCGAACcctcgaggtcgacataactt-3′ Kanamycin ORF flanked by 50-bp homology arms for gD1 locus
P20 5′-GGAGCCGGGGCTAGGAGCAAAGGGGGCGGTCGGGGGAGGGCCTAGGCCGCgagcccttaattaaccggtg-3′
gD5upper 5′-CGGAGGCTGGCGCTGCTGT-3′ gD5-DIG-labeled probe
gD5lower 5′-ACAGCGTGCGCCCCACCTGC-3′
gD1upper 5′-GACGACGAGCTGGGACTGATT-3′ gD1-DIG-labeled probe
gD1lower 5′-CGGGGGTCTGACTCTC-3′
a

Underlining indicates the restriction site used for cloning. The binding part of the primers is shown in lowercase type.

b

The letters in boldface type indicate an HA tag.

c

The letters in boldface type indicate a V5 tag.