TABLE 1.
Oligonucleotide | Sequencea | Amplification product |
---|---|---|
P1 | 5′-GATCGAGCTCGTTAACCGACTCGGATTTTGGGC-3′ | 5′ of gD5 homology arm |
P2 | 5′-GATCGCGGCCGCAGTTGCTCGCTCGCAGCAAC-3′ | |
P3 | 5′-GATCACCGGTGCGGCCCGGGCCCTCCCCCG-3′ | 3′ of gD5 homology arm |
P4 | 5′-GATCGGTACCGTTAACGCGGTCGCCTGTAGCATGACGAAGC-3′ | |
P5 | 5′-ATAAGAATGCGGCCGCATGAAGGGCCGACATTGGCCGTGc-3′ | gD1 ORF fused to HA |
P6 | 5′-GATCGAATTCTCAAGCATAATCTGGAACATCATATGGATACCCGGGCAGCGCGCTGTAGt-3′b | |
P7 | 5′-GATCGGATCCATGCGGAGGCTGGCGCTGCT-3′ | gD5 ORF fused to V5 |
P8 | 5′-GATCAAGCTTTCACGTAGAATCGAGACCGAGGAGAGGGTTAGGGATAGGCTTACCCCCGGGCAGCGCGCTGTAGT-3′c | |
P9 | 5′-GATCGAGCTCGTTAACCTCCGACTACGCGCTCTACG-3′ | 5′ of gD1 homology arm |
P10 | 5′-GATCGGATCCGTTCGCCCGCTCGCAGCA-3′ | |
P11 | 5′-GATCAAGCTTGGGGCCTAGGCCCTCCCCC-3′ | 3′ of gD1 homology arm |
P12 | 5′-GATCGGTACCGTTAACGCGCCGAGAGCACGGC-3′ | |
P13 | 5′-GATCTCTAGAACCCGCATCCGCGGTGGCTTT-3′ | 5′ of gD1 flank and gD1 ORF without stop codon |
P14 | 5′-GATCGGATCCCCCGGGCAGCGCGCTGTAGTT-3′ | |
P15 | 5′-AGTCGGATCCTGAGCGGCCTAGGCCCTCCCCCGA-3′ | 3′ of gD1 flank |
P16 | 5′-GCATGAATTCAGGATCGACGCCAGTTGGCGCCGGAA-3′ | |
P17 | 5′-ACGTGGATCCCATGGTGAGCAAGGGCGAGGA-3′ | YFP ORF |
P18 | 5′-GATCGGATCCCTTGTACAGCTCGTCCATGC-3′ | |
P19 | 5′-GGGCGACTAGAGATACACTCGCCCCGCGCGGCTGCTGCGAGCGGGCGAACcctcgaggtcgacataactt-3′ | Kanamycin ORF flanked by 50-bp homology arms for gD1 locus |
P20 | 5′-GGAGCCGGGGCTAGGAGCAAAGGGGGCGGTCGGGGGAGGGCCTAGGCCGCgagcccttaattaaccggtg-3′ | |
gD5upper | 5′-CGGAGGCTGGCGCTGCTGT-3′ | gD5-DIG-labeled probe |
gD5lower | 5′-ACAGCGTGCGCCCCACCTGC-3′ | |
gD1upper | 5′-GACGACGAGCTGGGACTGATT-3′ | gD1-DIG-labeled probe |
gD1lower | 5′-CGGGGGTCTGACTCTC-3′ |
Underlining indicates the restriction site used for cloning. The binding part of the primers is shown in lowercase type.
The letters in boldface type indicate an HA tag.
The letters in boldface type indicate a V5 tag.