Table 1.
ICK-specific tag TCAACCTTAT in SAGE Data sets for Breast Tissuesa
| Data Setb | Descriptionc | Number, TCAACCTTAT SAGE Tagsd | Data Set TCAACCTTAT, TAGS/Millione | Data Set, Total Tags in SAGE Libraryf |
|---|---|---|---|---|
| GSM383793 | Mammary gland, DCIS-4, High Grade, Comedo | 10 | 165 | 60605 |
| GSM383790 | Mammary gland, IDC, Node+, Gr3, ER+, PR+ | 8 | 119 | 67070 |
| GSM383827 | Metastasis to Node, from Primary Gr3, ER-, PR- | 5 | 111 | 45087 |
| GSM383796 | Mammary gland, IDC-4 High Gr, Node-, ER-, erbB2-, p53+ | 7 | 109 | 64095 |
| GSM383794 | Mammary gland, DCIS, High Grade, Comedo | 4 | 93 | 43098 |
| GSM383795 | Mammary gland, IDC-3, Low Gr, Node-, ER+, erbB2-, p53- | 5 | 73 | 68891 |
| GSM383797 | Breast CA, IDC-5, Low Grade, ER+, erbB2-, p53- | 4 | 66 | 60451 |
| GSM383789 | Mammary gland, IDC, Node+, Gr3 ER-, PR-, | 1 | 25 | 39364 |
| GSM383828 | Metastasis to Node, from Primary Gr3, ER+, PR+ | 1 | 17 | 60343 |
| GSM383824 | Metastasis to Lung, Primary Gr3, ER+, PR-low, Her2- | 0 | N/A | 49794 |
| GSM383829 | Mammary gland, Gestational Hyperplasia | 1 | 16 | 61704 |
a SAGE data sets for libraries from tissue.
b Data set names provided by NCBI.
c Notes from clinical annotation for source and pathology.
d Absolute tag count for TCAACCTTAT in the data set.
e TAGs per million non-linker tags.
f Total tags.