m(t) |
host mRNA concentration [M] |
n(t) |
reporter mRNA concentration [M] |
p(t) |
host protein concentration [M] |
q(t) |
total reporter protein concentration [M] |
|
|
r(t) |
active reporter protein concentration [M] |
|
|
Promoter activity and growth rate |
|
|
|
f(t) |
promoter activity [dimensionless] |
μ(t) |
growth rate [min-1] |
|
|
Kinetic constants |
|
|
|
κm
|
transcription rate constant [M min1] |
κp
|
translation rate constant [min-1] |
|
|
κr
|
folding rate constant [min-1] |
γm
|
host mRNA degradation constant [min-1] |
γn
|
reporter mRNA degradation constant [min-1] |
γp
|
host protein degradation constant [min-1] |
γq
|
reporter protein degradation constant [min-1] |