Table 1.
Whole pig genome microarray results.
| Target Description | Public ID | Fold | Expression | Level |
|---|---|---|---|---|
| Calcium binding | ||||
| S100 calcium binding protein A1 (S100A1) | [BX917468] | 6,72 | Brain | 2-3 |
| S100 calcium binding protein A14 (S100 A14) | [CK451794] | 5,81 | NP | |
| hippocalcin | [BI341922] | 3,40 | Brain | 1 |
| calbindin 2 | [BQ601075] | 3,20 | Brain | 2 |
| autotaxin | [BX919892] | 3,21 | Brain | 3 |
| apolipoprotein E (APOE) | [NM_214308.1] | 3,12 | Brain | 3 |
| secretory protein LOC348174 | [CN069500] | 3,00 | Brain | 4 |
| Protocadherin 15 precursor | [CO951943] | -5,08 | Brain | 3 |
| Cytoskeleton organization and biogenesis | ||||
| tubulin, alpha 1 (TUBA1) | [CO954570] | 6,33 | Brain | 3 |
| nesprin (SYNE1) | [CD572116] | 5,42 | Brain | 4 |
| actinin, alpha 2 (ACTN2) | [CF795401] | 4,30 | Brain | 4 |
| Glial fibrillary acidic protein (GFAP) | [BF712769] | 4,13 | Brain | 1 |
| Glial fibrillary acidic protein (GFAP) | [BX671201] | 3,94 | Brain | 1 |
| Neurofilament heavy polypepteide 200 kDa | [CF180627] | 3,74 | Brain | 3 |
| h1-calponin | [NM_213878.1] | 3,35 | Brain | 4 |
| Transcription regulation | ||||
| Basic transcription element binding protein 1(BTEB1) | [BG382637] | 3,12 | Brain | 4 |
| Homeobox protein Meis1 | [CO941421] | -3,18 | Brain | 4 |
| Retinoic acid receptor RXR-gamma | [CF181317] | -3,20 | Brain | 4 |
| Zinc finger protein IA-1(Insm1) | [BQ603242] | -3,82 | Brain | 2 |
| KIT ligand (KITLG) | [NM_214269.1] | -3,92 | Brain | 3 |
| Homeobox protein Meis1 | [AW346968] | -4,12 | Brain | 4 |
| Zinc finger protein ZFPM2 | [CN159819] | -4,36 | Brain | 3 |
| Transcription factor AP-2 gamma (AP2-gamma) | [BG609515] | -4,48 | Brain | 4 |
| Jumonji domain containing protein 2C | [BF712754] | -6,68 | Brain | 4 |
| Transcription factor AP-2 alpha (AP2-alpha) | [AJ657914] | -7,08 | Brain | 3 |
| Signal transduction | ||||
| n-chimaerin | [CD572334] | 13,67 | Brain | 2 |
| ADP-ribosyl cyclase 1 | [BP159691] | 4,84 | Brain | 3* |
| Troponin C, slow skeletal and cardiac muscles (TN-C) | [BG382598] | 3,64 | Brain | 4 |
| histamine receptor H1 | [BF710024] | 3,28 | Brain | 4 |
| Lipid phosphate phosphohydrolase 1 (PAP2-alpha) | [CF796129] | 3,22 | Brain | 4 |
| Frizzled 1 precursor (Frizzled-1) | [AJ682600] | -3,23 | ? | |
| proenkephalin | [BI181438] | -3,36 | Brain | 3 |
| TGF-beta receptor type I precursor | [AF317296.1] | -3,57 | Brain | 4 |
| Retinoic acid-binding protein II, cellular (CRABP-II) | [CN160216] | -3,67 | Brain | 4 |
| Central nervous system development | ||||
| neurogranin | [BX675498] | 4,91 | Brain | 2 |
| proteolipid protein 1 (PLP) | [BQ601157] | 4,87 | Brain | 2 |
| proteolipid protein 1 (PLP) | [BQ601666] | 4,09 | Brain | 2 |
| Myelin basic protein (MBP) | [NM_001001546.1] | 4,08 | Brain | 3 |
| carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 | [BF188991] | 4,07 | Brain | 4 |
| Enhancer-of-split and hairy-related protein 2 (SHARP-2) | [CO993157] | 3,18 | Brain | 4 |
| Slit homolog 2 protein precursor (Slit-2) | [BF712064] | 3,06 | Brain | 4 |
| protocadherin 18 (PCDH18) | [CF368788] | -3,21 | Brain | 3 |
| Other genes | ||||
| ribonuclease, RNase A family, 1 | [BG894750] | 11,44 | ? | |
| armadillo repeat containing, X-linked 1 (ARMCX1) | [CK464699] | 10,15 | Brain | 4 |
| parkin isoform 1; parkin | [CO994470] | 9,12 | Brain | 4 |
| major facilitator superfamily domain containing 4 | [BE012554] | 7,09 | Brain | 3 |
| collagen, type XXI, alpha 1 (COL21A1) | [BF440682] | 7,08 | Brain | 3 |
| Protein C20orf103 precursor | [CF180509] | 6,72 | Brain | 2 |
| Sus scrofa arachidonate 12-lipoxygenase (ALOX15) | [NM_213931.1] | 6,05 | Brain | 4 |
| phosphorylase, glycogen | [CF365721] | 5,90 | Brain | 4* |
| muscle glycogen phosphorylase | [CF179951] | 5,75 | Brain | 4* |
| coagulation factor V | [NM_214120.1] | 4,57 | Brain | 4 |
| Atrophin-1 interacting protein 1 | [CO949606] | 4,51 | Brain | 1 |
| prominin 1 | [CN163054] | 4,41 | Brain | 3 |
| dendrin (DDN) | [CF179783] | 4,26 | Brain | 2-3 |
| CUB and sushi multiple domains protein 2 | [BI183640] | 4,21 | Brain | 4 |
| Pleckstrin and Sec7 domain containing protein 3 (Cytohesin) | [CN157336] | 4,05 | Brain | 4 |
| Probable serine protease HTRA4 precursor | [CK450639] | 3,78 | Brain | 4* |
| Ras associated | [BI181239] | 3,73 | ? | |
| Membrane protein MLC1 | [CF368389] | 3,53 | Brain | 2 |
| Tetratricopeptide repeat protein 7B | [BQ600843] | 3,43 | Brain | 3 |
| T cell receptor | [AB079532.1] | 3,43 | ? | |
| Aquaporin 1(AQP-1) | [CF792401] | 3,40 | Brain | 3 |
| Claudin-1 | [BF188991] | 3,38 | Brain | 4 |
| Membrane protein MLC1 | [AW478160] | 3,34 | Brain | 2-3 |
| Potential carboxypeptidase-like protein X2 precursor | [BQ604567] | 3,30 | Brain | 4 |
| retinaldehyde binding protein 1 | [BX917253] | 3,28 | Brain | 4 |
| fibronectin type III domain containing 1(FSD1) | [CF366197] | 3,26 | Brain | 1-2 |
| syntaxin binding protein 5 (tomosyn) | [AJ666521] | 3,25 | Brain | 4 |
| hypothetical protein FLJ21127 | [CN070291] | 3,14 | Brain | 4 |
| T-cell receptor beta chain C region | [AB079530.1] | 3,05 | ? | |
| Zinc transporter 3 (ZnT-3) | [BI346660] | 3,03 | Brain | 3 |
| NYD-SP14 protein | [BI404541] | 3,01 | Brain | 4 |
| Collagen alpha 3(IV) chain precursor | [BX918155] | 3,00 | Brain | 4 |
| KIAA1333 | [BF703163] | -3,00 | Brain | 4 |
| Huntingtin-interacting protein 14 | [BQ603863] | -3,02 | Brain | 4 |
| vitelline membrane outer layer 1 homolog | [CF368035] | -3,03 | ? | |
| Epithelial V-like antigen 1 precursor | [CF787898] | -3,12 | ? | |
| Similar to insulin-like growth factor binding protein | [BQ599569] | -3,17 | Brain | 4 |
| Probable RNA-dependent helicase p72 (DEAD-box protein 17) | [CF360658] | -3,21 | Brain | 4 |
| Decorin precursor (Bone proteoglycan II) (PG-S2) | [BI182181] | -3,23 | ? | |
| Epoxide hydrolase 1 (Microsomal epoxide hydrolase) | [CF364362] | -3,31 | Brain | 3 |
| metallophosphoesterase 1 (MPPE1) | [CO954514] | -3,39 | Brain | 3-4 |
| NSE1 | [AJ659310] | -3,46 | Brain | 3 |
| NSE1 | [AJ657499] | -3,52 | Brain | 3 |
| serine/threonine protein kinase TAO1 homolog; STE20-like kinase | [BX676366] | -3,63 | Brain | 4 |
| dopamine receptor D2 | [BF712306] | -3,68 | Brain | 4 |
| Collagen alpha 1(I) chain precursor | [AF201723.1] | -3,84 | ? | |
| Endothelial lipase precursor (EDL) | [BX915625] | -7,23 | NP | |
| Probable RNA-dependent helicase p72 (DEAD-box protein 17) | [BX668358] | -7,37 | Brain | 4 |
| Probable RNA-dependent helicase p72 (DEAD-box protein 17) | [CO991338] | -10,71 | Brain | 4 |
Result of microarray analysis of differentially expressed genes with annotation in E60 and E80 cortex.