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. Author manuscript; available in PMC: 2010 May 27.
Published in final edited form as: Methods Mol Biol. 2009;541:311–335. doi: 10.1007/978-1-59745-243-4_14

Table 1.

Reactions and stoichiometry matrix defining the example model

Reaction Propensity Stoichiometry (ν)
[L] [R] [RL] [E] [RLE]
(1) L+R→RL k1[L][R] −1 −1 +1 0 0
(2) RL→R+L k2[RL] +1 +1 −1 0 0
(3) RL+E→RLE k3[RL][E] 0 0 −1 −1 +1
(4) RLE →RL+E k4[RLE] 0 0 +1 +1 −1