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. 2010 Apr 21;11:198. doi: 10.1186/1471-2105-11-198

Table 3.

Performance of single folding indexes on set C

Sn Sp fp AUC
Poodle-W 0.75 0.87 0.13 0.90
gVSL2 0.83 0.76 0.24 0.86
<Ec> 0.74 0.81 0.19 0.86
<P> 0.72 0.80 0.20 0.83
HQ 0.69 0.75 0.25 0.78

Performance of HQ, mean packing <P>, mean pairwise energy <Ec>, gVSL2 and Poodle-W in discriminating natively unfolded proteins from folded ones among those in our own set C (see Methods). Mean packing threshold is fixed at 20.55 and mean pairwise energy threshold is fixed at -0.37 a.e.u.