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. 2010 May 27;6(5):e1000922. doi: 10.1371/journal.ppat.1000922

Table 2. Repeat sequence pairs associated with the major IS elements in B. mallei.

5′-end 3′-end
IS407A
Inverted Repeatsa TGACCTGCCCCCT b AGGGGGCAGGTCA
Example direct target repeatsc TGTC TGTC
GTAG GTAG
TTCG TTCG
GGGC GGGC
ATCA ATCA
ISBma1
Inverted Repeats GGTTCATCGC GCGATGAACC d
Example direct target repeats AATTTTTT AATTTTTT
AAAAAAAT AAAAAAAT
AAAAAATA AAAAAATA
CTTTTTTT CTTTTTTT
TTTTTCTT TTTTTCTT
ISBma2
Inverted Repeats CAGATTGCTGACAAACCC GGGTTCGTCAGCAGTCTG
Example direct target repeats AGCCAGCTTGCGCTGGCT AGCCAGCTTGCGCTGGCT
ACCGCAGCGAAGGCTGCGGT ACCGCAGCGAAGGCTGCGGT
AATGGGCCGGAAACGGCCCATT AATGGGCCGGAAACGGCCCATT
AGGCCCGCCGAAGCGGGCTT GGGCCGTTTCAAACGGCCCG
GGGGCGCTTCGGCGCCCC GGGGCGCTTCGGCGCCCC

aInverted repeats are part of the IS elements, that are present on either side of the ends.

bConsensus sequences of the inverted repeats.

cFive examples of the direct repeat target duplicates, which encompass the IS elements. The entire data can be found in Table S3.

dGCGATGA overlaps with the 3′-terminus of the transposase gene in the upstream.