TABLE 1.
Oligonucleotide primers used in this study
The abbreviations are: GAPDH, glyceraldehyde-3-phosphate dehydrogenase; mut, mutant; SDM, site-directed mutagenesis; oligo, oligonucleotide. Bold and underlined sequences highlight specific mutations.
| Gene/Fragment location | Method | Forward sequence (5′ to 3′) | Reverse sequence (5′ to 3′) |
|---|---|---|---|
| PAI-1 | qRT-PCR | gctgaattcctggagctcag | ctgcgccacctgctgaaaca |
| GAPDH | qRT-PCR | aacctgccaagtacgatgacatc | gtagcccaggatgcccttga |
| PAI-1 promoter AP-1 (−154/−147 bp)mut | SDM | cacacacacacatgccttgccaagtcccagagaggg | Ccctctctgggacttggcaaggcatgtgtgtgtgtg |
| PAI-1 promoter HRE-1 (−158/−151 bp)mut | SDM | cacacacatgtatgcctcagcaagtcccagagaggg | Ccctctctgggacttgctgaggcatacatgtgtgtg |
| PAI-1 promoter AP-1/HRE1 (−154/−151 bp)mut | SDM | cacacacacacaatgctcagcaagtcccagagaggg | Ccctctctgggacttgctgagcattgtgtgtgtgtg |
| PAI-1:WT oligo (−163/−143 bp) | EMSA | acacacacatgcctcagcaag | cttgctgaggcatgtgtgtgt |
| PAI-1:HRE-1/AP-1mut | EMSA | acacacaaaagccttggcaag | cttgccaaggcttttgtgtgt |
| PAI-1:AP1mut | EMSA | acacacacaagccttggcaag | cttgccaaggcttgtgtgtgt |
| PAI-1 promoter (−366/−82 bp) | ChIP | ctccaagctgaacactagggg | ctggctctgggagtccgtctg |
| PAI-1 promoter (−114/+98 bp) | ChIP | ccgctggctgttcagacggac | ctggcggcggctgctgagctg |