Table 5.
SNP | PHS Mean (s.e.)† |
Gelb Center Mean (s.e.)† |
FHCRC Mean (s.e.)† |
---|---|---|---|
rs13254738 | p=0.94 | p=0.0004 | p=0.26 |
AA | 70.6 (0.3) | 61.4 (0.2) | 59.7 (0.3) |
AC | 70.4 (0.3) | 62.4 (0.2) | 60.3 (0.3) |
CC | 70.5 (0.6) | 62.8 (0.4) | 59.6 (0.6) |
rs6983561 | p=0.43 | p=0.25 | p=0.80 |
AA | 70.5 (0.2) | 62.0 (0.1) | 60.0 (0.2) |
AC/CC | 70.0 (0.7) | 61.4 (0.5) | 59.8 (0.6) |
rs6983267 | p=0.20 | p=0.003 | p=0.59 |
TT | 71.0 (0.5) | 62.7 (0.3) | 60.3 (0.5) |
GT | 70.6 (0.3) | 62.1 (0.2) | 59.9 (0.3) |
GG | 70.0 (0.4) | 61.4 (0.2) | 59.7 (0.4) |
rs7000448 | p=0.88 | p=0.10 | p=0.81 |
CC | 70.6 (0.3) | 62.1 (0.2) | 60.1 (0.3) |
CT | 70.4 (0.3) | 61.8 (0.2) | 59.9 (0.3) |
TT | 70.7 (0.5) | 62.6 (0.3) | 59.7 (0.6) |
rs1447295 | p=0.33 | p=0.06 | p=0.21 |
CC | 70.6 (0.2) | 62.2 (0.2) | 59.8 (0.2) |
CA/AA | 70.1 (0.4) | 61.5 (0.3) | 60.4 (0.4) |
rs7008482 | p=0.70 | p=0.22 | |
TT | 70.7 (0.30 | 61.8 (0.2) | - |
GT | 70.4 (0.3) | 62.1 (0.2) | - |
GG | 70.3 (0.6) | 62.4 (0.4) | - |
rs4430796 | p=0.08 | p=0.02 | p=0.30 |
GG | 71.0 (0.5) | 62.5 (0.3) | 60.3 (0.5) |
AG | 70.7 (0.3) | 62.1 (0.2) | 60.1 (0.3) |
AA | 69.8 (0.4) | 61.5 (0.3) | 59.5 (0.3) |
rs1859962 | p=0.25 | p=0.03 | p=0.67 |
TT | 70.6 (0.4) | 62.4 (0.3) | 60.2 (0.4) |
GT | 70.8 (0.3) | 62.1 (0.2) | 60.0 (0.3) |
GG | 70.0 (0.4) | 61.5 (0.3) | 59.7 (0.4) |
# of risk alleles | p=0.008 | p=0.0004 | p=0.40 |
0–2 | 72.1 (0.6) | 63.7 (0.4) | 60.2 (0.6) |
3 | 71.2 (0.5) | 62.1 (0.3) | 59.8 (0.5) |
4 | 70.3 (0.4) | 61.7 (0.3) | 60.7 (0.4) |
5 | 70.0 (0.4) | 61.6 (0.3) | 59.5 (0.4) |
6–9 | 69.7 (0.5) | 61.8 (0.3) | 59.7 (0.4) |
All results from ANOVA