Skip to main content
. 2010 Feb 15;38(10):3489–3501. doi: 10.1093/nar/gkq027

Figure 1.

Figure 1.

The strategy and design of a bacterial assay for detecting RNA loop–loop interactions that inhibit U1A–hpII-mediated antitermination complex formation. (A) A bacterial two-plasmid system based on phage λ N-mediated antitermination for detection of RNA–polypeptide interactions. (B) The secondary structure of the region of the RNA transcript containing the target U1 hpII and downstream RNA stem–loop library. The randomized nucleotides are indicated by N, and the regions corresponding to the PstI, BsrGI, and BamHI sites are shown in italic. (C) Possible mechanism for the disruption of antitermination complex formation by antisense RNA stem–loops.