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. 2010 Jun 27;365(1548):1871–1878. doi: 10.1098/rstb.2010.0054

Table 2.

Bayesian estimates of evolutionary parameters for WNV in suburban Chicago over timea.

year number of samples range of dates of sample collection substitution rateb (95% HPD) TMRCAc (95% HPD)
2005 128 21 July–4 October 6.87 × 10−6 (1.11 × 10−6–1.50 × 10−5) 532 (143–1243)
2006  80 13 June–7 September 13.11 × 10−6 (4.82 × 10−7–2.74 × 10−5) 408 (92–1253)
2007  46 5 July–9 September 4.48 × 10−6 (6.73 × 10−8–1.38 × 10−5) 2057 (122–7584)
all years 254 21 July 2005–9 September 2007 4.17 × 10−6 (3.34 × 10−6–5.04 × 10−6) 1206 (984–1531)

aAll evolutionary parameters were estimated under the Bayesian skyline plot uncorrelated exponential relaxed clock model.

bMean number of nucleotide substitutions per site per day. HPD: high posterior density.

cMean time to the most recent common ancestor (TMRCA), in days.