Skip to main content
. 2010 Jun 3;6(6):e1000798. doi: 10.1371/journal.pcbi.1000798

Table 5. 10 top most expanded (Ex) new families, from the set of over 180 curated novel families identified in this work.

Family ID Family description g n G N Ov/Ex/Es Most advanced PSI target (id, center, status)
PB155142 Contains putative TonB-linked outer membrane proteins, part of SusC? Remote homology to several outer membrane receptors 930 158 14 58 37.15/59.32/0.10 #N/A
HGC00106 Contains putative TonB-linked outer membrane proteins, part of SusC? 908 76 14 8 74.90/52.09/0.20 APC62223.1, MCSG, Purified
HGC00024 N-terminal subdomain of SusD 819 56 14 6 91.26/46.60/0.20 3ejn, JCSG, In PDB
PB001404 Branch of SusD family 764 61 13 5 78.27/44.40/0.19 3cgh, JCSG, In PDB
PB004588 No hypothesis about function 105 0 14 0 666.89/7.00/0.22 390317, JCSG, Diffraction-quality Crystals
PB064361 Contains putative lipoproteins 60 0 13 0 381.08/4.29/0.20 #N/A
PB012771 No hypothesis about function 92 1 21 1 292.16/3.68/0.32 NYSGXRC-T1444, NYSGXRC, Work Stopped
PB000790 Branch of SusD family 98 17 13 4 34.58/3.60/0.19 3cgh, JCSG, In PDB
PB202086 Remote homology to Flagellar basal body-associated protein 21 0 5 0 133.38/3.50/0.08 #N/A

Exact definitions of the Ex category is given in the Methods section. For the details of the Table 5 columns see the legend for Table 4.