Table 1.
Composition of the predicted organellar proteome of K. stuttgartiensis.
| Protein family | Examples of the predicted organellar proteins | Locus tag | # proteins |
|---|---|---|---|
| Cytochrome C proteins | cytochrome c551 peroxidase | kuste2905 | 49 |
| cytochrome c6 | kustc0563 | ||
| cbb3-type cytochrome c oxidase subunit 1 (CcoN) | kustc0429 | ||
| hepta heme protein | kuste2855 | ||
| Respiratory complex proteins | cd1 nitrite reductase (NirS) | kuste4136 | 50 |
| NAD(P)H:quinone oxidoreductase chain 5 | kustc0838 | ||
| proton-translocating NADH dehydrogenase I chain A (NuoA) | kustc0822 | ||
| NADH:ubiquinone oxidoreductase subunit M | kustc0840 | ||
| Transporters | Ammonium transporter 1 | kustc0381 | 27 |
| Nitrite Transporter 1 (FocA) | kustd1720 | ||
| Nitrite/nitrate antiporter (NarK) | kuste2335 | ||
| copper-transporting ATPase | kuste2247 | ||
| Protein translocation system | SecDF-YajC accessory complex (YajC) | kustd1963 | 5 |
| SecYEG translocation complex (SecE) | kuste2951 | ||
| Transmembrane pore (TatC) | kustc0286 | ||
| Tat signal recognition (TatA/B) | kuste2348 | ||
| Cytochrome C maturation system | thiol-disulfide oxidoreductase (ResA) | kustc0860 | 6 |
| cytochrome c-type biogenesis protein (ResC) | kustd1760 | ||
| thiol:disulfide interchange protein (DsbD) | kustc0946 | ||
| TPR proteins | N-acetylglucosaminyltransferase (O-GlcNAc transferase) | kuste2787 | 32 |
| kinesin light chain KLC (putative) | kuste2807 | ||
| Hypothetical and other proteins | 392 | ||
| Total proteins | 562 | ||
A summary of the predicted anammoxosomal sub-proteome of K. stuttgartiensis. In this set, 371 proteins are hypothetical proteins of unknown function. Some examples of proteins are listed, especially those with functions known to be related to anammox. Details of the predicted sub-proteome are stored in Additional file 2.