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. Author manuscript; available in PMC: 2010 Jun 5.
Published in final edited form as: J Struct Funct Genomics. 2010 Apr 11;11(1):51–59. doi: 10.1007/s10969-010-9086-7

Figure 3.

Figure 3

Analysis of the lipid-binding pocket of the human phosphatidylcholine transfer protein (PC-TP, PDB id 1LN1, [27]). A. Conservation of residues lining the pocket is calculated and displayed by ConSurf [33]. B. Electrostatic surface potential is calculated and imaged with GRASP [34]. C. Volume plot of the ligand binding pocket is generated by VOIDOO [35]. D. The PC-TP ligand DLP (1,2-dilinoleoyl-dn-glycero-3-phosphocholine) is shown in molecular representation. Residues lining the ligand-binding pocket and predicted to be functionally important are delineated in C and D.