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. 2010 May 25;61(10):2829–2842. doi: 10.1093/jxb/erq116

Table 2.

Putative small GTPases from peach (Prunus persica), accession numbers, and their closest Arabidopsis homologues

Prunus persica GTPases Prunus persica accession no.a Arabidopsis closest homologue Arabidopsis AGI gene
PpRABA1-1 TA5861_3760b AtRABA1f At5g60860
PpRABA1-2 TA7012_3760b AtRABA1c At5g45750
PpRABA2 TA4712_3760b AtRABA2a At1g09630
PpRABA4 TA4817_3760b AtRABA4a At5g65270
PpRABA5 TA5151_3760b AtRABA5e At1g05810
PpRABA6 AJ823264c AtRABA6a At1g73640
2200746346d
2167819167d
PpRABB1 TA4959_3760b AtRABB1b At4g35860
PpRABC1 TA6278_3760b AtRABC1 At1g43890
2187916258d
PpRABC2 TA5305_3760b AtRABC2a At5g03530
PpRABD2-2 TA3537_3760b AtRABD2c At4g17530
PpRABD2-1 TA4413_3760b AtRABD2c At4g17530
PpRABE1 TA5649_3760b AtRABE1a At3g53610
PpRABF2 BUO42728c AtRABF2a At5g45130
PpRABG3 TA6078_3760b AtRABG3f At3g18820
PpARFA1-1 TA3041_3760b AtARFA1f At1g10630
PpARFA1-2 TA4389_3760b AtARFA1b At5g14670
PpARLA1 BU044827c AtARLA1c At3g49870
PpARFC1 TA5387_3760b AtARFC1 At3g22950
PpARLB1 BU043462c AtARLB1 At5g52210
2167362775d
2167505212d
PpSARA1 TA5313_3760b AtSAR1 At4g02080
PpARLC1 DY653778c AtARLC1 At2g18390
2126540771d
AJ825266c
PpROP3 TA3784_3760b AtROP3 At2g17800
PpROP4 TA6502_3760b AtROP4 At1g75840
AJ870547c
PpRAN3 TA3256_3760b AtRAN3 At5g55190

The names of peach GTPases, belonging to the RAB, ARF/ARL/SAR, ROP, and RAN families, are listed in the first column.

a

Details of the accession numbers of sequences employed to obtain the corresponding GTPase coding sequences. Accession numbers identified by different superscript letters refer to different databases:

b

sequences from the TIGR database, including plant transcript assemblies (TAs) from expressed transcripts collected from dbEST (ESTs) and from the NCBI GenBank nucleotide database;

c

singletons that are not assembled into TAs and retain their GenBank accession numbers as identifiers;

d

sequences from the WGS-Prunus persica Trace Archive.

In the third and fourth column the closest, Arabidopsis homologues and their corresponding AGI numbers are given.