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. 2010 Mar 11;3(1-4):17–30. doi: 10.1007/s11568-010-9134-1

Table 5.

List of 54 SNPs in 43 genes, along with the corresponding correlation coefficient between minor allele frequency and antibody response, that showed significant association with antibody response in half-sample 1

Chromosome no. Gene SNP rs # Corr. coeff. (r) Chromosome no. Gene SNP rs # Corr. coeff. (r)
1 TNFRSF8 12736809 −0.94 4 IRF2 12512614 −0.96
1 TNFRSF1B 505844 −0.97 6 BAT2 2736172 −0.91
1 IL12RB2 7555183 −0.99 6 HLA-DOB 2859579 −0.99
1 TGFBR3 1017956 −0.94 6 IL22RA2 13197049 0.92
1 XCL1 6700487 0.91 6 CCR6 1571878 −0.96
1 PTGS2 2745557 0.93 8 DEFB1 2978873 0.98
1 IRF6 2073486 −0.93 8 DEFB1 2977772 0.91
1 NLRP3 12565738 −0.92 8 IKBKB 3747811 −0.95
1 NLRP3 10754558 0.98 9 PAX5 7031673 −0.91
2 IL1R2 13022757 −0.93 10 IL2RA 10905668 0.98
2 IL1R2 4850993 −0.95 10 ITGB1 10827164 −0.95
2 IL1R2 3218848 0.98 10 CXCL12 10900030 0.96
2 IL1R2 2110562 −0.92 10 MAPK8 12358297 −0.95
2 IL1RL1 10208293 0.95 10 CHUK 2230804 −0.91
2 IL18R1 1362348 0.92 11 CD59 3181274 −0.94
2 CTLA4 231779 −0.99 11 CD44 112762 −0.97
3 IL5RA 2290610 −0.98 11 IL10RA 4252306 0.93
3 CMTM8 4132830 −0.96 11 TIRAP 8177352 0.98
3 CMTM7 17029530 −0.97 13 IL17D 1888001 0.94
3 CD80 491407 −1.00 13 TNFRSF19 7338328 −0.98
3 CD80 2228017 −0.97 16 IL4R 4787423 0.96
3 CD80 2222631 −0.93 17 CSF3 2227321 −0.95
3 CD80 16829988 −0.99 17 MAP2K6 12946388 −0.95
3 CD86 2681411 0.97 21 ITGB2 235326 0.99
3 CD86 17203439 0.95 22 MAPK1 743409 −0.93
4 TLR1 5743572 0.93 22 MAPK1 2283792 −0.98
4 CXCL13 171388 −0.94 22 MAPK1 3788332 −0.94