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. 2010 Jun 9;5(6):e11031. doi: 10.1371/journal.pone.0011031

Table 3. Confirmation of selected genes using RT-PCR.

Encoded Protein/Gene Symbol Microarray RT-PCR
APAP IFN-β IFN-β+APAP APAP IFN-β IFN-β+APAP
Heme oxygenase (decycling) 1 Hmox1 2.7 −1.5 2.3 9.6 −3.8 12.1
Keratin 18 Krt18 −1.3 1.1 −2.0 −1.7 1.1 −2.0
B-cell linker Blnk −1.0 2.6 1.2 −2.3 10.1 6.1
2′–5′ Oligoadenylate synthetase 2 Oas2 1.0 1.8 1.3 −1.3 26.8 13.0
Interleukin-1 receptor-associated kinase 2 Irak2 −1.1 −1.0 −1.6 −1.5 −2.8 −4.0
EG634650 EG −1.2 6.5 4.1 −3.6 95.3 24.7
Interferon-induced protein with tetratricopeptide repeats 3 Ifit3 −1.1 49.6 29.9 −3.1 376.9 109.2
Interferon Stimulated Gene 15 ubiquitin-like modifier Isg15 −1.3 20.0 12.3 −1.2 245.1 96.1
2′–5′ Oligoadenylate synthetase-like 1 Oasl1 −1.2 13.3 7.3 −1.8 298.0 80.6
Z-DNA binding protein 1 Zbp1 −1.2 13.1 6.7 −2.6 113.5 71.3

The absolute fold-change was determined using semi-quantitative RT-PCR on 5 genes from the 4 hour time point and compared to the microarray analysis. In all cases numbers are relative to vehicle control.