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. Author manuscript; available in PMC: 2010 Jun 10.
Published in final edited form as: Stat Sci. 2009 Nov 1;24(4):489–502. doi: 10.1214/09-sts297

Table 2.

Simulated median ranks of a true susceptibility SNP with a recessive effect and log-odds-ratio value of log(3) for alternative tests. The results are based on 50 simulated datasets, each of which has approximately 550 cases and 550 controls and 450,000 SNPs.

MAF Prospective Retrospective Empirical-Bayes
0.1 112163 8117 44319
0.2 1888 203 52
0.3 656 210 27
0.4 15 82 2