Skip to main content
. 2010 Jun 16;98(12):2984–2992. doi: 10.1016/j.bpj.2010.02.057

Table 1.

Refinement statistics

Molecule dmin (Å) Scattering model Npar Nhkl Rwork / Rfree (%)
Relative energy (Kcal/mol)
Fobs/σ(Fobs)>0 Fobs/σ(Fobs)>3
Lysozyme 0.65 IAM 20681 187165 8.40 / 9.05 8.21 / 8.87 109.3
AMOEBA-IAS 21887 187165 7.87 / 8.60 7.66 / 8.38 0
Trypsin 0.84 IAM 29523 138150 10.90 / 11.62 10.60 / 11.28 93.4
AMOEBA-IAS 30597 138150 10.45 / 11.11 10.16 / 10.77 0
DNA 0.89 IAM 7786 30475 14.21 / 16.59 14.10 / 16.37 NA

For the DNA case, only the IAM model with AMOEBA chemical forces was used, because the AMOEBA-IAS model did not lead to a significant statistical improvement (data not shown).