TABLE 2.
Thermocycle conditions used in PCR and sequencing reactions
| Target | Reaction | Conditions |
No. of cycles | ||
|---|---|---|---|---|---|
| Denaturation | Annealing | Extension | |||
| porA | PCR | 94°C, 1 min | 68°C, 1 min | 72°C, 2 min | 30 |
| Seqa | 96°C, 40 s | 50°C, 40 s | 60°C, 4 min | 40 | |
| fHbp | PCR | 96°C, 30 s | 63°C, 30 s | 72°C, 1 min | 30 |
| Seq | 96°C, 10 s | 53°C, 5 s | 60°C, 4 min | 25 | |
| gna2132 | PCR | 96°C, 30 s | 57°C, 30 s | 72°C, 1 min | 30 |
| Seq | 96°C, 10 s | 57°C, 5 s | 60°C, 4 min | 25 | |
| nadA | PCR | 96°C, 30 s | 56°C, 30 s | 68°C, 1 min 20 s | 30 |
| PCRb | 96°C, 30 s | 70°C, 30 s | 72°C, 1 min 20 s | 33 | |
| Seq | 96°C, 10 s | 52°C, 5 s | 60°C, 4 min | 25 | |
Seq, sequencing.
Conditions for PCR using internally directed PCR primers.